RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 ELMO2Q96JJ3 720 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 INPP4AQ96PE3 977 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-204ENST00000397545 MAGEB5Q9BZ81 275 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 PPCSQ9HAB8 311 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 DNAJC16Q9Y2G8 782 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 PLSCR1O15162 318 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 PMPCBO75439 489 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ADRA1DP25100 572 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ELK3P41970 407 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 CLEC16AQ2KHT3 1053 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ATP13A4Q4VNC1 1196 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 BOLA3Q53S33 107 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 TEDDM1Q5T9Z0 273 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 FAM131BQ86XD5 332 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 RNF148Q8N7C7 305 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-204ENST00000397545 EXD1Q8NHP7 514 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF606Q8WXB4 792 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 MYH1P12882 1939 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 E9PBE3 544 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
CCDC40-204ENST00000397545 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-204ENST00000397545 KLHL41O60662 606 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ICAM1P05362 532 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 CTSHP09668 335 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 PTGER2P43116 358 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 JAG1P78504 1218 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 TSPY1Q01534 308 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ZCWPW2Q504Y3 356 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 SCUBE1Q8IWY4 988 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 TTC39CQ8N584 583 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 CYGBQ8WWM9 190 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ZBTB45Q96K62 511 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-204ENST00000397545 CNBD2Q96M20 576 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 FSBPO95073 299 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 IZUMO2Q6UXV1 221 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 TAS2R42Q7RTR8 314 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 SZRD1Q7Z422 152 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 INPP5DQ92835 1189 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 PGM2Q96G03 612 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 MYH8P13535 1937 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 OGTO15294 1046 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 GNAT1P11488 350 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 ETS1P14921 441 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 TCF7P36402 384 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 AVPR1AP37288 418 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 Q4G0T1 1027 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 MAP1SQ66K74 1059 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 THEM5Q8N1Q8 247 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 PRELID2Q8N945 189 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 AGAP11Q8TF27 550 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CCT7Q99832 543 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 MRPL40Q9NQ50 206 aaKnown RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 NDFIP2Q9NV92 336 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 SALL4Q9UJQ4 1053 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 ATP8B3O60423 1300 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 O00370 1275 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CDH8P55286 799 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 ZCCHC23Q6ZST2 131 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 LNX1Q8TBB1 728 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 ARHGEF38Q9NXL2 777 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.16□□□□□ -0.62
CCDC40-204ENST00000397545 POLIQ9UNA4 740 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CDY2AQ9Y6F7 541 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 CDY1Q9Y6F8 540 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 MAST2Q6P0Q8 1798 aa11.16□□□□□ -0.62
CCDC40-204ENST00000397545 SNX3O60493 162 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ACADSP16219 412 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 TFE3P19532 575 aaPredicted RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 TGM2P21980 687 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 PTPN4P29074 926 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 CAP2P40123 477 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 DDX60LQ5H9U9 1706 aaKnown RBP11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 RXFP2Q8WXD0 754 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ALG3Q92685 438 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 CYP4F12Q9HCS2 524 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 SLCO1B3Q9NPD5 702 aa11.15□□□□□ -0.62
CCDC40-204ENST00000397545 UBP1Q9NZI7 540 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms