RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 DNAJC12Q9UKB3 198 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 TSPAN16Q9UKR8 245 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 HEPACAM2A8MVW5 462 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 TNFRSF10BO14763 440 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 CFHP08603 1231 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 PDE6CP51160 858 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 TPM4P67936 248 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 NFKBIBQ15653 356 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 FUCA2Q9BTY2 467 aa26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 TRMT61BQ9BVS5 477 aaKnown RBP26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 LSM14BQ9BX40 385 aaKnown RBP26.8■■□□□ 1.88
TSPAN4-207ENST00000397411 FAM86C2PA6NEL3 165 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 CKMP06732 381 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 USP17L7P0C7H9 530 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 HDCP19113 662 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 FCARP24071 287 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 GPC5P78333 572 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 STILQ15468 1287 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 TMEM31Q5JXX7 168 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 DHX40Q8IX18 779 aaKnown RBP26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 UBA3Q8TBC4 463 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 SMG9Q9H0W8 520 aaKnown RBP26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 PNPLA8Q9NP80 782 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 OBSL1O75147 1896 aa26.79■■□□□ 1.88
TSPAN4-207ENST00000397411 ZNF840PA6NDX5 716 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 TMEM221A6NGB7 291 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 M0R296 226 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 TADA3O75528 432 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 PSMC3P17980 439 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 BRD2P25440 801 aaKnown RBP26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 WEE1P30291 646 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 BCAT1P54687 386 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 KCNMA1Q12791 1236 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 GRM2Q14416 872 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 CNGA2Q16280 664 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 MFSD6LQ8IWD5 586 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 CELF5Q8N6W0 485 aaKnown RBP26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 ARL14EPQ8N8R7 260 aaPredicted RBP26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 TTC16Q8NEE8 873 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 DEPDC1BQ8WUY9 529 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 OVCA2Q8WZ82 227 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 CYP2S1Q96SQ9 504 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 UBXN6Q9BZV1 441 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 BRD9Q9H8M2 597 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 SIX2Q9NPC8 291 aa26.78■■□□□ 1.88
TSPAN4-207ENST00000397411 ANAPC1Q9H1A4 1944 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 O00370 1275 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 ZNF18P17022 549 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 PFKPQ01813 784 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 UBXN1Q04323 297 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 BST2Q10589 180 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 RAPGEF1Q13905 1077 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 LCLAT1Q6UWP7 414 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 VITQ6UXI7 678 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 TFAP2BQ92481 460 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 TLR8Q9NR97 1041 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 TDP1Q9NUW8 608 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 THG1LQ9NWX6 298 aaKnown RBP26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 IL37Q9NZH6 218 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 CNTN6Q9UQ52 1028 aa26.77■■□□□ 1.88
TSPAN4-207ENST00000397411 C2orf78A6NCI8 922 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 HHLA1C9JL84 531 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 ZNF263O14978 683 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 MED7O43513 233 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 CAVIN2O95810 425 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 CALCAP01258 141 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 GDI1P31150 447 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 ZNF132P52740 706 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 PDE4CQ08493 712 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 FILIP1LQ4L180 1135 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 KLHDC7AQ5VTJ3 777 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 PIGZQ86VD9 579 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 TTC30AQ86WT1 665 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 PBXIP1Q96AQ6 731 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 MFSD1Q9H3U5 465 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 LRRC4Q9HBW1 653 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 SLC2A4RGQ9NR83 387 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 OBP2AQ9NY56 170 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 GMIPQ9P107 970 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 WNT16Q9UBV4 365 aa26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 NUP210Q8TEM1 1887 aaPredicted RBP26.76■■□□□ 1.87
TSPAN4-207ENST00000397411 M0QYV0 167 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 STK25O00506 426 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 THAP12O43422 761 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 GPR37L1O60883 481 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 PFKLP17858 780 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 RFX1P22670 979 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 GNA15P30679 374 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 HECTD3Q5T447 861 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 GPRIN1Q7Z2K8 1008 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 BPIFB1Q8TDL5 484 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 NACA2Q9H009 215 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 CA14Q9ULX7 337 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 SCML2Q9UQR0 700 aa26.75■■□□□ 1.87
TSPAN4-207ENST00000397411 LRRC10BA6NIK2 292 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 LGALS16A8MUM7 142 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 GOLGA6L19H0YKK7 550 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 XPO1O14980 1071 aaKnown RBP26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 PRAMEF12O95522 483 aa26.74■■□□□ 1.87
TSPAN4-207ENST00000397411 SETSIPP0DME0 302 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms