RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 NOX5Q96PH1 765 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 SLC4A5Q9BY07 1137 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 RHOBTB2Q9BYZ6 727 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 IRX2Q9BZI1 471 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 CSNK1G1Q9HCP0 422 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 STK39Q9UEW8 545 aa17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 CNOT8Q9UFF9 292 aaKnown RBP17.87■□□□□ 0.45
TSPAN4-205ENST00000397406 XPO1O14980 1071 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 MBTPS2O43462 519 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 AP1G2O75843 785 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 GABBR2O75899 941 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 ERBB2P04626 1255 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 PLA2G4AP47712 749 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 GSCP56915 257 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 KRT17Q04695 432 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 KCNC3Q14003 757 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 NFE2Q16621 373 aaPredicted RBP17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 SLC8B1Q6J4K2 584 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 KIAA1841Q6NSI8 718 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 LLGL2Q6P1M3 1020 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 GPR65Q8IYL9 337 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 VPS52Q8N1B4 723 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 EFHBQ8N7U6 833 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 ZMIZ2Q8NF64 920 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 SMOQ99835 787 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 ZBP1Q9H171 429 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 CYLDQ9NQC7 956 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 PAXBP1Q9Y5B6 917 aa17.86■□□□□ 0.45
TSPAN4-205ENST00000397406 TCRBV5S1A1TA0A578 114 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 MACROD2A1Z1Q3 448 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 HIDE1A8MVS5 230 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 ADAM12O43184 909 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 BDNFP23560 247 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 RGS7P49802 495 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 UBE3AQ05086 875 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 ZP2Q05996 745 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 GPR17Q13304 367 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 CYP4A22Q5TCH4 519 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 PLEKHA7Q6IQ23 1121 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 TMEM110Q86TL2 294 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 SPATA2LQ8IUW3 424 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 RHOT2Q8IXI1 618 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 RNF10Q8N5U6 811 aaKnown RBP17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 MSANTD4Q8NCY6 345 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 SLC35G2Q8TBE7 412 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 C18orf8Q96DM3 657 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 FUBP3Q96I24 572 aaKnown RBP eCLIP17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 C16orf45Q96MC5 204 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 CLSTN3Q9BQT9 956 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 OSGEPQ9NPF4 335 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 TLR9Q9NR96 1032 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 MYO1AQ9UBC5 1043 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 CDY1Q9Y6F8 540 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 GREB1Q4ZG55 1949 aa17.85■□□□□ 0.45
TSPAN4-205ENST00000397406 C19orf67A6NJJ6 358 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 E5RJQ4 531 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 C2CD2LO14523 706 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 NCK2O43639 380 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 BUB1O43683 1085 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 LILRB3O75022 631 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 MTA2O94776 668 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 VNN2O95498 520 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 URODP06132 367 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 CPB1P15086 417 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 RPL17P18621 184 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 HADHBP55084 474 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 MAP3K7CLP57077 242 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 SLC8A3P57103 927 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 PTPN14Q15678 1187 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 SMAD2Q15796 467 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 LIN9Q5TKA1 542 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 PIGZQ86VD9 579 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 XYLT1Q86Y38 959 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 GJD3Q8N144 294 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 IPO4Q8TEX9 1081 aaKnown RBP17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 KCTD13Q8WZ19 329 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 HSFY1Q96LI6 401 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 KCNK16Q96T55 309 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 UBXN6Q9BZV1 441 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 ST7Q9NRC1 585 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 UVRAGQ9P2Y5 699 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 STRIP2Q9ULQ0 834 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 LZTS1Q9Y250 596 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 PCDHB5Q9Y5E4 795 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 CAPN6Q9Y6Q1 641 aa17.84■□□□□ 0.45
TSPAN4-205ENST00000397406 PLXNA3P51805 1871 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 MYO16Q9Y6X6 1858 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 WDR27A2RRH5 827 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 MTMR11A4FU01 709 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 HHLA1C9JL84 531 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 MOCS3O95396 460 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 CTSAP10619 480 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 CYP2F1P24903 491 aa17.83■□□□□ 0.45
TSPAN4-205ENST00000397406 ARPP19P56211 112 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms