RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZACNQ401N2 412 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 LRRC38Q5VT99 294 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 C1orf146Q5VVC0 180 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 RIPOR1Q6ZS17 1223 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 MARK2Q7KZI7 788 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 PODNQ7Z5L7 613 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 RBM15BQ8NDT2 890 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SLC35B2Q8TB61 432 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 WDR83Q9BRX9 315 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 APOBEC3GQ9HC16 384 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 TBC1D22BQ9NU19 505 aa9.57□□□□□ -0.88
CAPN3-206ENST00000397163 XPO7Q9UIA9 1087 aaKnown RBP9.57□□□□□ -0.88
CAPN3-206ENST00000397163 COPEO14579 308 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MAGEC1O60732 1142 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 RPL22P35268 128 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 PLOD1Q02809 727 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF252P-AS1Q0IIN9 211 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 SMTNL2Q2TAL5 461 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 C15orf39Q6ZRI6 1047 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 RAPH1Q70E73 1250 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 NAT8LQ8N9F0 302 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 JDP2Q8WYK2 163 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 HOMER2Q9NSB8 354 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 DDX56Q9NY93 547 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ZNRF3Q9ULT6 936 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 WDR64B1ANS9 1081 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 E5RJQ4 531 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 F8W8V4 182 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 PDLIM1O00151 329 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CST8O60676 142 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TMCC1O94876 653 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TMEM63AO94886 807 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 C4BPAP04003 597 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 DHRS4L1P0CG22 281 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 KITP10721 976 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 GARTP22102 1010 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MMP8P22894 467 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ETV4P43268 484 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MRPS9P82933 396 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TMPRSS15P98073 1019 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF200P98182 395 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 OGDHQ02218 1023 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 BTKQ06187 659 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 R3HDM1Q15032 1099 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TRMT5Q32P41 509 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 SYCP2LQ5T4T6 812 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 NET1Q7Z628 596 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TREML1Q86YW5 311 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ARID3BQ8IVW6 561 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CPXCR1Q8N123 301 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ARHGAP18Q8N392 663 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MTBPQ96DY7 904 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ECSITQ9BQ95 431 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MARCOQ9UEW3 520 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 STRIP2Q9ULQ0 834 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CCDC195A0A1B0GUA6 201 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 EXTL3O43909 919 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 CALB1P05937 261 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ELK3P41970 407 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 HSD17B4P51659 736 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 WNT7BP56706 349 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 DLGAP5Q15398 846 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 KBTBD12Q3ZCT8 623 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 DPY19L2Q6NUT2 758 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 PPP1R2P3Q6NXS1 205 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ANO5Q75V66 913 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 NIPA1Q7RTP0 329 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 PRPF39Q86UA1 669 aaKnown RBP9.56□□□□□ -0.88
CAPN3-206ENST00000397163 FAM160B2Q86V87 743 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ULK2Q8IYT8 1036 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ZNF606Q8WXB4 792 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 RILPQ96NA2 401 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 ACAP3Q96P50 834 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 PANX3Q96QZ0 392 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 MECRQ9BV79 373 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 SYNPO2Q9UMS6 1093 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 UBIAD1Q9Y5Z9 338 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 COMMD3-BMI1R4GMX3 469 aa9.56□□□□□ -0.88
CAPN3-206ENST00000397163 TCRBV9S1A1TA0A576 114 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 TCP10L2B9ZVM9 353 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 NPM3O75607 178 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 VNN1O95497 513 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 ALDH18A1P54886 795 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 CDC16Q13042 620 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 PIGHQ14442 188 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 PSMD6Q15008 389 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 KCNT1Q5JUK3 1230 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 MFSD4BQ5TF39 518 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 SESTD1Q86VW0 696 aa9.55□□□□□ -0.88
CAPN3-206ENST00000397163 ST13P4Q8IZP2 240 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-206ENST00000397163 FAM71DQ8N9W8 422 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms