RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TPM3P06753 285 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 USP46P62068 366 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 IQCB1Q15051 598 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 PAQR9Q6ZVX9 377 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 PDZD8Q8NEN9 1154 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 USP13Q92995 863 aaPredicted RBP15.44■□□□□ 0.06
SEC13-208ENST00000397109 SLC35C1Q96A29 364 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 LRRC3BQ96PB8 259 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 TRPC7Q9HCX4 862 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 TMEM30AQ9NV96 361 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 HMGXB4Q9UGU5 601 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 RWDD2AQ9UIY3 292 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 ANAPC1Q9H1A4 1944 aa15.44■□□□□ 0.06
SEC13-208ENST00000397109 BECN2A8MW95 431 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 CKMP06732 381 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 DCNP07585 359 aaKnown RBP15.43■□□□□ 0.06
SEC13-208ENST00000397109 HDCP19113 662 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 CD58P19256 250 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 YWHAQP27348 245 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
SEC13-208ENST00000397109 CACNA2D1P54289 1103 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 CETN1Q12798 172 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 MIA3Q5JRA6 1907 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 SARM1Q6SZW1 724 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.43■□□□□ 0.06
SEC13-208ENST00000397109 SLC2A14Q8TDB8 520 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 OVCA2Q8WZ82 227 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 MED15Q96RN5 788 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 HNRNPABQ99729 332 aaKnown RBP15.43■□□□□ 0.06
SEC13-208ENST00000397109 SMG9Q9H0W8 520 aaKnown RBP15.43■□□□□ 0.06
SEC13-208ENST00000397109 CSNK1G1Q9HCP0 422 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 KRT82Q9NSB4 513 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 DLGAP2Q9P1A6 1054 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 PIAS3Q9Y6X2 628 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 PIEZO1Q92508 2521 aa15.43■□□□□ 0.06
SEC13-208ENST00000397109 ZNF840PA6NDX5 716 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 P4HA2O15460 535 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 LRRN2O75325 713 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 ADCY5O95622 1261 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 FAM200BP0CF97 657 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CCDC130P13994 396 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CD72P21854 359 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 FMO5P49326 533 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 STX17P56962 302 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 YWHAEP62258 255 aaKnown RBP15.42■□□□□ 0.06
SEC13-208ENST00000397109 TPM4P67936 248 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 TAF10Q12962 218 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 ORC1Q13415 861 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CC2D1AQ6P1N0 951 aaPredicted RBP15.42■□□□□ 0.06
SEC13-208ENST00000397109 ARL14EPQ8N8R7 260 aaPredicted RBP15.42■□□□□ 0.06
SEC13-208ENST00000397109 C12orf29Q8N999 325 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 FAM3CQ92520 227 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 FBXO32Q969P5 355 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 KCNK16Q96T55 309 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 GKN1Q9NS71 199 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CISHQ9NSE2 258 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 FAM49BQ9NUQ9 324 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 IL37Q9NZH6 218 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 CCL26Q9Y258 94 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 TICRRQ7Z2Z1 1910 aa15.42■□□□□ 0.06
SEC13-208ENST00000397109 H0Y858 1186 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 TNFRSF10BO14763 440 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 TCF3P15923 654 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 TARSP26639 723 aaKnown RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 MARSP56192 900 aaKnown RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 C11orf57Q6ZUT1 292 aaPredicted RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 RALGPS2Q86X27 583 aaPredicted RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 WHAMMQ8TF30 809 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 ATOH1Q92858 354 aaPredicted RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 TATDN2Q93075 761 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 CLDN23Q96B33 292 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 TWNKQ96RR1 684 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 CYP2S1Q96SQ9 504 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 SMOQ99835 787 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 FBXO44Q9H4M3 255 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 ARHGAP26Q9UNA1 814 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 MTF2Q9Y483 593 aaPredicted RBP15.41■□□□□ 0.06
SEC13-208ENST00000397109 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
SEC13-208ENST00000397109 CACNA1IQ9P0X4 2223 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 C2orf78A6NCI8 922 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 GOLGA6L6A8MZA4 724 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 ABL1P00519 1130 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 TBXAS1P24557 533 aaPredicted RBP15.4■□□□□ 0.06
SEC13-208ENST00000397109 ADORA2BP29275 332 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 RPS9P46781 194 aaKnown RBP15.4■□□□□ 0.06
SEC13-208ENST00000397109 SLC5A3P53794 718 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 MAP3K7CLP57077 242 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 IFRD2Q12894 506 aaPredicted RBP15.4■□□□□ 0.06
SEC13-208ENST00000397109 PDGFRLQ15198 375 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 ANGPT1Q15389 498 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 ITPRIPL2Q3MIP1 535 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 LUZP1Q86V48 1076 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 KIAA1958Q8N8K9 716 aa15.4■□□□□ 0.06
SEC13-208ENST00000397109 TMEM176AQ96HP8 235 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms