RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPECC1L-ADORA2AF8WAN1 911 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 P4HA2O15460 535 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 CILPO75339 1184 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 AP1G2O75843 785 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 FAM200BP0CF97 657 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 RAP1GAPP47736 663 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 TUBP50607 506 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 NRLP54845 237 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 SLC7A9P82251 487 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 NR1H3Q13133 447 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 RUNX3Q13761 415 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 DCAF17Q5H9S7 520 aaPredicted RBP14.78□□□□□ -0.04
SEC13-204ENST00000397099 SNX30Q5VWJ9 437 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 FUKQ8N0W3 1084 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 CPA6Q8N4T0 437 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 CCDC26Q8TAB7 109 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 OSCP1Q8WVF1 389 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 ATP2A3Q93084 1043 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 LRRC3BQ96PB8 259 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 HNRNPABQ99729 332 aaKnown RBP14.78□□□□□ -0.04
SEC13-204ENST00000397099 CHRDQ9H2X0 955 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 MMRN2Q9H8L6 949 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 GKN1Q9NS71 199 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 CACNA1IQ9P0X4 2223 aa14.78□□□□□ -0.04
SEC13-204ENST00000397099 ZNF292O60281 2723 aa14.77□□□□□ -0.04
SEC13-204ENST00000397099 FAM92AA1XBS5 289 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 CLDN5O00501 218 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 SLC9A3R1O14745 358 aaPredicted RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 GADD45BO75293 160 aaPredicted RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 TBXAS1P24557 533 aaPredicted RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 CTHP32929 405 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 IFNAR2P48551 515 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 SLC8A3P57103 927 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 TAF10Q12962 218 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 USP4Q13107 963 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 MTF1Q14872 753 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 SPOPLQ6IQ16 392 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 PAQR9Q6ZVX9 377 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 MAML2Q8IZL2 1156 aaPredicted RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 ZNF687Q8N1G0 1237 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 ARL14EPQ8N8R7 260 aaPredicted RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 SLC2A14Q8TDB8 520 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 FBXO32Q969P5 355 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.05
SEC13-204ENST00000397099 KRT82Q9NSB4 513 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 KIAA1468Q9P260 1216 aa14.77□□□□□ -0.05
SEC13-204ENST00000397099 FANCMQ8IYD8 2048 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 C2orf78A6NCI8 922 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 TNFRSF10BO14763 440 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 OLFM2O95897 454 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 PRKCSHP14314 528 aaPredicted RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 CCR3P51677 355 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 SLC5A3P53794 718 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 PMS1P54277 932 aaKnown RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 USP46P62068 366 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 PAK1Q13153 545 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 FZD5Q13467 585 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 ZNF77Q15935 545 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 CCDC40Q4G0X9 1142 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 TTI2Q6NXR4 508 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 NELFBQ8WX92 580 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 ATRIPQ8WXE1 791 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 ERCC4Q92889 916 aaPredicted RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 SLC35C1Q96A29 364 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 CYFIP2Q96F07 1278 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 EEF2KMTQ96G04 330 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 DUSP9Q99956 384 aaKnown RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 UBXN6Q9BZV1 441 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 SMG9Q9H0W8 520 aaKnown RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 LMAN1LQ9HAT1 526 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 TLR8Q9NR97 1041 aaKnown RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 DUS2Q9NX74 493 aaKnown RBP14.76□□□□□ -0.05
SEC13-204ENST00000397099 GTSE1Q9NYZ3 720 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 CCL26Q9Y258 94 aa14.76□□□□□ -0.05
SEC13-204ENST00000397099 TRIM49BA6NDI0 452 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 SHISA7A6NL88 538 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 PPP1R3GB7ZBB8 358 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 NFATC1O95644 943 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 OAS1P00973 400 aaKnown RBP14.75□□□□□ -0.05
SEC13-204ENST00000397099 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 CHRNB1P11230 501 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 CD58P19256 250 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 PSEN1P49768 467 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 MARSP56192 900 aaKnown RBP14.75□□□□□ -0.05
SEC13-204ENST00000397099 GRSF1Q12849 480 aaKnown RBP eCLIP14.75□□□□□ -0.05
SEC13-204ENST00000397099 MTAPQ13126 283 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 HECTD3Q5T447 861 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 SMYD5Q6GMV2 418 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 TSSK4Q6SA08 328 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 CLEC17AQ6ZS10 378 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 TADA2BQ86TJ2 420 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 SPEM1Q8N4L4 309 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 TTC8Q8TAM2 541 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 SH3RF2Q8TEC5 729 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 ZFYVE19Q96K21 471 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 CYP2S1Q96SQ9 504 aa14.75□□□□□ -0.05
SEC13-204ENST00000397099 CDK5RAP1Q96SZ6 601 aaKnown RBP14.75□□□□□ -0.05
SEC13-204ENST00000397099 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms