RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 MTF1Q14872 753 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 PON2Q15165 354 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 ZNF667Q5HYK9 610 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TXNDC11Q6PKC3 985 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 B3GALNT2Q8NCR0 500 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 PLEKHO2Q8TD55 490 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TRPM5Q9NZQ8 1165 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 RAB23Q9ULC3 237 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 TRAF3IP3Q9Y228 551 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 GCN1Q92616 2671 aaKnown RBP12.86□□□□□ -0.35
GAPDH-202ENST00000396856 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
GAPDH-202ENST00000396856 F8VP50 259 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 IKBKBO14920 756 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 MAPK13O15264 365 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 TCF3P15923 654 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.351e-8■■■□□ 16.7
GAPDH-202ENST00000396856 USP4Q13107 963 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
GAPDH-202ENST00000396856 ZNF77Q15935 545 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 NFIL3Q16649 462 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 CPA6Q8N4T0 437 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 TAF4BQ92750 862 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 TNIP3Q96KP6 325 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
GAPDH-202ENST00000396856 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 LOC400499M0QZD8 3231 aa12.85□□□□□ -0.35
GAPDH-202ENST00000396856 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 HDCP19113 662 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 TRIM21P19474 475 aaKnown RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 RPL13P26373 211 aaKnown RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 SATB1Q01826 763 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 ENPEPQ07075 957 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 DPYDQ12882 1025 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 SIM2Q14190 667 aaPredicted RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 ZACNQ401N2 412 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 TMEM196Q5HYL7 178 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 TRIM68Q6AZZ1 485 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 PRR23BQ6ZRT6 265 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 KIAA1958Q8N8K9 716 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 DUS2Q9NX74 493 aaKnown RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 KIF26AQ9ULI4 1882 aaPredicted RBP12.84□□□□□ -0.35
GAPDH-202ENST00000396856 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
GAPDH-202ENST00000396856 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 K7ESF4 209 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 ATG13O75143 517 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 ZNF202O95125 648 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 RTN3O95197 1032 aaPredicted RBP12.83□□□□□ -0.36
GAPDH-202ENST00000396856 KCNK5O95279 499 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 VNN1O95497 513 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 ARSAP15289 507 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 DRD1P21728 446 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 NR2F2P24468 414 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 HOXA6P31267 233 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 CNR2P34972 360 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 IFNAR2P48551 515 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 VAMP7P51809 220 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 USP46P62068 366 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 DLG4P78352 724 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 NR1H3Q13133 447 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 FBXO43Q4G163 708 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 UNQ6494/PRO21346Q6UXR6 183 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 Q6ZS52 159 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
GAPDH-202ENST00000396856 SV2AQ7L0J3 742 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 OVCA2Q8WZ82 227 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
GAPDH-202ENST00000396856 B3GNT5Q9BYG0 378 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
GAPDH-202ENST00000396856 ECT2Q9H8V3 914 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms