RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 IL18RAPO95256 599 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 OLFM2O95897 454 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 GABRG2P18507 467 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ACAT1P24752 427 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ABCD1P33897 745 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 GNL2Q13823 731 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ZRSR1Q15695 479 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 CCDC142Q17RM4 750 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ADALQ6DHV7 355 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SLFN12LQ6IEE8 588 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 FAM171BQ6P995 826 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TOGARAM2Q6ZUX3 1019 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SLCO6A1Q86UG4 719 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 NAXDQ8IW45 347 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 SCN4BQ8IWT1 228 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 MYCT1Q8N699 235 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 LRIG1Q96JA1 1093 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 PLIN2Q99541 437 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 REEP2Q9BRK0 252 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TTLL2Q9BWV7 592 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 RNF38Q9H0F5 515 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 ARHGEF4Q9NR80 690 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 GDAP2Q9NXN4 497 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TRPM5Q9NZQ8 1165 aa9.04□□□□□ -0.96
SCFD1-202ENST00000396629 AGO2Q9UKV8 859 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 APOBEC2Q9Y235 224 aaKnown RBP9.04□□□□□ -0.96
SCFD1-202ENST00000396629 TRAK2O60296 914 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 CBFA2T3O75081 653 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 ADH5P11766 374 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 TRMT11Q7Z4G4 463 aaKnown RBP9.03□□□□□ -0.96
SCFD1-202ENST00000396629 CXorf38Q8TB03 319 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 ZNF419Q96HQ0 510 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-202ENST00000396629 LLPHQ9BRT6 129 aaKnown RBP9.03□□□□□ -0.96
SCFD1-202ENST00000396629 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 ZDHHC4Q9NPG8 344 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 CALCOCO1Q9P1Z2 691 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 HCN2Q9UL51 889 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 AGAP1Q9UPQ3 857 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 SMG1Q96Q15 3661 aaKnown RBP9.03□□□□□ -0.96
SCFD1-202ENST00000396629 ACACAQ13085 2346 aa9.03□□□□□ -0.96
SCFD1-202ENST00000396629 ZNF840PA6NDX5 716 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 TISP43B9A030 160 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 SLC26A4O43511 780 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ZNF217O75362 1048 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 FAM13AO94988 1023 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ADH1CP00326 375 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 PCSK1P29120 753 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 PPP3CCP48454 512 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 LHX1P48742 406 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 USP46P62068 366 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 KDSRQ06136 332 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 VSTM1Q6UX27 236 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 TMPRSS7Q7RTY8 843 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ETFBKMTQ8IXQ9 262 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 LRRC52Q8N7C0 313 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 TRIML1Q8N9V2 468 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ST6GALNAC4Q9H4F1 302 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 FAM124BQ9H5Z6 455 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 CD248Q9HCU0 757 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 MAGEC2Q9UBF1 373 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 CPQQ9Y646 472 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ASH1LQ9NR48 2969 aaKnown RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 A0A1W2PQF6 199 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 HCRTO43612 131 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 DKK1O94907 266 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 OAS1P00973 400 aaKnown RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 NEK4P51957 841 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 WNT7BP56706 349 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 PLEKHG6Q3KR16 790 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 LIMS2Q7Z4I7 341 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 TOP6BLQ8N6T0 577 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ZNF513Q8N8E2 541 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 CDK5RAP3Q96JB5 506 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 HSPA12BQ96MM6 686 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 ZDHHC5Q9C0B5 715 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 TBC1D14Q9P2M4 693 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 SUSD2Q9UGT4 822 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
SCFD1-202ENST00000396629 URB1O60287 2271 aaKnown RBP9.02□□□□□ -0.97
SCFD1-202ENST00000396629 APC2O95996 2303 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 ATP2C2O75185 946 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 ITGB3P05106 788 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 HOXB2P14652 356 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 ADSSP30520 456 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 NTSR1P30989 418 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 NOP14P78316 857 aaKnown RBP9.01□□□□□ -0.97
SCFD1-202ENST00000396629 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
SCFD1-202ENST00000396629 GAD2Q05329 585 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 PREPLQ4J6C6 727 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-202ENST00000396629 LY6G5CQ5SRR4 150 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 DENND5BQ6ZUT9 1274 aa9.01□□□□□ -0.97
SCFD1-202ENST00000396629 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms