RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 ATP2C2O75185 946 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 GABBR2O75899 941 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 TMEM63AO94886 807 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 GCLCP48506 637 aaPredicted RBP17.33■□□□□ 0.37
TRIM39-205ENST00000396551 CDH6P55285 790 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 CDO1Q16878 200 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 DCAF4L1Q3SXM0 396 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 ACOT1Q86TX2 421 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 FAM71DQ8N9W8 422 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 SNX27Q96L92 541 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 TINF2Q9BSI4 451 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 FAM49AQ9H0Q0 323 aaPredicted RBP17.33■□□□□ 0.37
TRIM39-205ENST00000396551 FAM124BQ9H5Z6 455 aaPredicted RBP17.33■□□□□ 0.37
TRIM39-205ENST00000396551 RSAD1Q9HA92 442 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 HES2Q9Y543 173 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.37
TRIM39-205ENST00000396551 GPR32O75388 356 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 RBP3P10745 1247 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 SCTRP47872 440 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 GTF2A2P52657 109 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 DPYSL3Q14195 570 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 ZBTB6Q15916 424 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.36
TRIM39-205ENST00000396551 DGKDQ16760 1214 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 CCDC14Q49A88 953 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 FAM182AQ5T1J6 154 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 KHSRPQ92945 711 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRIM39-205ENST00000396551 C18orf25Q96B23 403 aaPredicted RBP17.33■□□□□ 0.36
TRIM39-205ENST00000396551 LPIN3Q9BQK8 851 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 KIF9Q9HAQ2 790 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.36
TRIM39-205ENST00000396551 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 H0YHG0 523 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 NDC80O14777 642 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 OLFML1Q6UWY5 402 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 ANKRD23Q86SG2 305 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 TTC39CQ8N584 583 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 ANKS4BQ8N8V4 417 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 P3H4Q92791 437 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 FAM49BQ9NUQ9 324 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
TRIM39-205ENST00000396551 PCNTO95613 3336 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 GHRP10912 638 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 WDR4P57081 412 aaKnown RBP17.32■□□□□ 0.36
TRIM39-205ENST00000396551 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 NUGGCQ68CJ6 796 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 SPATA18Q8TC71 538 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 MCF2LO15068 1137 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 SPAG7O75391 227 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 GLRA4Q5JXX5 417 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 PLEKHA5Q9HAU0 1116 aa17.32■□□□□ 0.36
TRIM39-205ENST00000396551 E7ESA3 106 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 HCRTO43612 131 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 SSTR1P30872 391 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 STX2P32856 288 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 ATP11AP98196 1134 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 MTM1Q13496 603 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 EFTUD2Q15029 972 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM39-205ENST00000396551 SLC27A1Q6PCB7 646 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 ARHGEF18Q6ZSZ5 1173 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 MRRFQ96E11 262 aaKnown RBP17.31■□□□□ 0.36
TRIM39-205ENST00000396551 SLC4A5Q9BY07 1137 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 PHACTR1Q9C0D0 580 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 GPATCH2LQ9NWQ4 482 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 RABGEF1Q9UJ41 708 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 DERAQ9Y315 318 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 FOXN2P32314 431 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 ARL4CP56559 192 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 HIC1Q14526 733 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 STILQ15468 1287 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 EFHC2Q5JST6 749 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 CGB2Q6NT52 195 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 MAGEB18Q96M61 343 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 TGS1Q96RS0 853 aaKnown RBP17.31■□□□□ 0.36
TRIM39-205ENST00000396551 OSMRQ99650 979 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 NKIRAS1Q9NYS0 192 aa17.31■□□□□ 0.36
TRIM39-205ENST00000396551 FAM47DPA6NHR8 397 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 DPYSL4O14531 572 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 IL4RP24394 825 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 HNRNPH1P31943 449 aaKnown RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 IQSEC1Q6DN90 963 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 SLC35F5Q8WV83 523 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ADAM33Q9BZ11 813 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 DPEP3Q9H4B8 488 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 NXF3Q9H4D5 531 aaKnown RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 TRABDQ9H4I3 376 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 NR1H3Q13133 447 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ZKSCAN8Q15776 578 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PLEKHH3Q7Z736 793 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 RNF157Q96PX1 679 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PTPN18Q99952 460 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 XPO7Q9UIA9 1087 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms