RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 FNBP1Q96RU3 617 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 TBC1D10AQ9BXI6 508 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 ERVK-5Q9HDB9 667 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 PTPRJQ12913 1337 aa12.52□□□□□ -0.41
PHACTR3-205ENST00000395636 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 MSCO60682 206 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 SLC26A2P50443 739 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 CLDN10P78369 228 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF200P98182 395 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 BTG3Q14201 252 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PSMD6Q15008 389 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 DGKDQ16760 1214 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 CLEC16AQ2KHT3 1053 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 IER5Q5VY09 327 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 LRRC74BQ6ZQY2 392 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 JAMLQ86YT9 394 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 GFM2Q969S9 779 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 HHIPL1Q96JK4 782 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ROPN1BQ9BZX4 212 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 TRIM31Q9BZY9 425 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ROPN1Q9HAT0 212 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 A6NJR5 290 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PODXLO00592 558 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 RASGRF2O14827 1237 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ATP9BO43861 1147 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 DCTN3O75935 186 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PABPC4LP0CB38 370 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 HOXD8P13378 290 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ELNP15502 786 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 TNFSF9P41273 254 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 HPCAP84074 193 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 NOGQ13253 232 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 SLFN12LQ6IEE8 588 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 MFSD5Q6N075 450 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 C15orf39Q6ZRI6 1047 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 MARK2Q7KZI7 788 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ECHDC2Q86YB7 292 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PRELID2Q8N945 189 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 NAT14Q8WUY8 206 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 DHX38Q92620 1227 aaKnown RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PLVAPQ9BX97 442 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 RNF186Q9NXI6 227 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 CHORDC1Q9UHD1 332 aaPredicted RBP12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
PHACTR3-205ENST00000395636 A0A087WZ62 844 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 A0A0J9YVX5 310 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 SMIM31A0A1B0GVY4 71 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 BIRC5O15392 142 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 ENTPD5O75356 428 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 TNNI1P19237 187 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 CD97P48960 835 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 ITGA9Q13797 1035 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 MTFR1Q15390 333 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 GRIK4Q16099 956 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 SPATA24Q86W54 205 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 OXCT2Q9BYC2 517 aaPredicted RBP12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 EPB41L4BQ9H329 900 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 ETNK2Q9NVF9 386 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 ZNF212Q9UDV6 495 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 AGO2Q9UKV8 859 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 TMED5Q9Y3A6 229 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 USH1CQ9Y6N9 552 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 SMIM23A6NLE4 172 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 SUPT3HO75486 399 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 LDHAP00338 332 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PGK1P00558 417 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PIGRP01833 764 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PYGMP11217 842 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 VAV1P15498 845 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 FGFR4P22455 802 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 MLH1P40692 756 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 PTGIRP43119 386 aa12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 YARSP54577 528 aaKnown RBP12.5□□□□□ -0.41
PHACTR3-205ENST00000395636 OXCT1P55809 520 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms