RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 XP32Q5T750 250 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 LIN54Q6MZP7 749 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 RGS7BPQ6MZT1 257 aaPredicted RBP6.52□□□□□ -1.37
CDKN3-203ENST00000395577 LVRNQ6Q4G3 990 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 KLHL17Q6TDP4 642 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 CYP26C1Q6V0L0 522 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDKN3-203ENST00000395577 RUBCNQ92622 972 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 TBATAQ96M53 351 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 FAM227BQ96M60 508 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 TMOD4Q9NZQ9 345 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 KCNE5Q9UJ90 142 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 CA14Q9ULX7 337 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 DTNAQ9Y4J8 743 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 LRRFIP2Q9Y608 721 aaKnown RBP6.52□□□□□ -1.37
CDKN3-203ENST00000395577 HS3ST4Q9Y661 456 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 NUP153P49790 1475 aaKnown RBP6.52□□□□□ -1.37
CDKN3-203ENST00000395577 CTTNBP2Q8WZ74 1663 aa6.52□□□□□ -1.37
CDKN3-203ENST00000395577 SPATA31A3Q5VYP0 1347 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 RICTORQ6R327 1708 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 A0A1W2PS29 197 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 FCHO1O14526 889 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 PRICKLE3O43900 615 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 GLP2RO95838 553 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 SRGAP2BP0DMP2 458 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 CD6P30203 668 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 NPTX2P47972 431 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 RPS7P62081 194 aaKnown RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 HLXQ14774 488 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 RBM20Q5T481 1227 aaKnown RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 SFRP4Q6FHJ7 346 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 LRRC55Q6ZSA7 311 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 CCDC117Q8IWD4 279 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 ADGRG5Q8IZF4 528 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 TMEM132CQ8N3T6 1108 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 CPT1CQ8TCG5 803 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 SNX19Q92543 992 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 TMEM125Q96AQ2 219 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 UBXN10Q96LJ8 280 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 TRIM5Q9C035 493 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 PRDM16Q9HAZ2 1276 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 GBA2Q9HCG7 927 aaPredicted RBP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 PGAP2Q9UHJ9 254 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKN3-203ENST00000395577 FPGT-TNNI3KV9GXZ4 949 aa6.51□□□□□ -1.37
CDKN3-203ENST00000395577 MYADML2A6NDP7 307 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 GRXCR1A8MXD5 290 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 AHRRA9YTQ3 701 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 EIF3FO00303 357 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 CD3EAPO15446 510 aaKnown RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TRIAP1O43715 76 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 ZFPL1O95159 310 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 AGR2O95994 175 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 CFIP05156 583 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 GYS1P13807 737 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 SLC5A2P31639 672 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TXKP42681 527 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 CXADRP78310 365 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 GPS1Q13098 491 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TAF12Q16514 161 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TRIM71Q2Q1W2 868 aaKnown RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 B3GNTL1Q67FW5 361 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 MICALCLQ6ZW33 695 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 RASGRP3Q8IV61 690 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TEX19Q8NA77 164 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 OTUD7AQ8TE49 926 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 TMEM171Q8WVE6 324 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 GRAMD1AQ96CP6 724 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 RNF31Q96EP0 1072 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
CDKN3-203ENST00000395577 EPS8L2Q9H6S3 715 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 MLXIPQ9HAP2 919 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 HELLSQ9NRZ9 838 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 DNAJB11Q9UBS4 358 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 ZNF69Q9UC07 566 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 SERTAD3Q9UJW9 196 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 YEATS2Q9ULM3 1422 aa6.5□□□□□ -1.37
CDKN3-203ENST00000395577 A0A0B4J269 797 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 PCDH17O14917 1159 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 NCAM2O15394 837 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 ACTL6BO94805 426 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 NTSR2O95665 410 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 PYGLP06737 847 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 ARP10275 920 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 HGFP14210 728 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 PRKAR1BP31321 381 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 ALDH18A1P54886 795 aaKnown RBP6.49□□□□□ -1.37
CDKN3-203ENST00000395577 TUBB3Q13509 450 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 CCNIQ14094 377 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 GEN1Q17RS7 908 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 SPDYE7PQ495Y7 208 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 CERCAMQ5T4B2 595 aa6.49□□□□□ -1.37
CDKN3-203ENST00000395577 VPS53Q5VIR6 699 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms