RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PSMC3P17980 439 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 CXCR2P25025 360 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ETFBP38117 255 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 MRPS22P82650 360 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 PPM1LQ5SGD2 360 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 IZUMO3Q5VZ72 239 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 EBF4Q9BQW3 602 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 RAB26Q9ULW5 256 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 BCS1LQ9Y276 419 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 NID2Q14112 1375 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 PCP4L1A6NKN8 68 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 H7C0C1 242 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TAF4O00268 1085 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 HSPA1AP0DMV8 641 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 HSPA1BP0DMV9 641 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 GRK2P25098 689 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 AQP5P55064 265 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 ARHGAP4P98171 946 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SEC23AQ15436 765 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TRPC4APQ8TEL6 797 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SLC5A5Q92911 643 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 PMEPA1Q969W9 287 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 NOL6Q9H6R4 1146 aaKnown RBP13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 KLQ9UEF7 1012 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 CDH22Q9UJ99 828 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 SATB2Q9UPW6 733 aa13.03□□□□□ -0.32
SLC28A1-203ENST00000394573 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 CCNT1O60563 726 aaKnown RBP13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 CYP1A2P05177 515 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 INHBBP09529 407 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 HSPA6P17066 643 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 CES1P23141 567 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 WEE1P30291 646 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 BMPR1AP36894 532 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 TUBA4AP68366 448 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 KCNK18Q7Z418 384 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 DEFB107AQ8IZN7 70 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 MYO1HQ8N1T3 1032 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 MED30Q96HR3 178 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 POLE4Q9NR33 117 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 GNPTGQ9UJJ9 305 aa13.02□□□□□ -0.32
SLC28A1-203ENST00000394573 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 GABRB3P28472 473 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 CACNB3P54284 484 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 DPY19L2P1Q6NXN4 242 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 NSMFQ6X4W1 530 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 LCORLQ8N3X6 602 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 HERPUD2Q9BSE4 406 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 HEMGNQ9BXL5 484 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 NCANO14594 1321 aa13.02□□□□□ -0.33
SLC28A1-203ENST00000394573 H3BMQ9 156 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 H3BUI4 141 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 KCNH1O95259 989 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PRDX6P30041 224 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PRAMEP78395 509 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PRKD1Q15139 912 aaPredicted RBP13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 STK11Q15831 433 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 RARS2Q5T160 578 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 ZNF618Q5T7W0 954 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 CALML4Q96GE6 196 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 COG8Q96MW5 612 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 C17orf80Q9BSJ5 609 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 RPF2Q9H7B2 306 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 GCNT4Q9P109 453 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 CPQQ9Y646 472 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 LRRN2O75325 713 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PRKCAP17252 672 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 PTPN1P18031 435 aaKnown RBP13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 FGFR3P22607 806 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 GRB10Q13322 594 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 ARHGAP44Q17R89 818 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 HEATR4Q86WZ0 1026 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 OLIG1Q8TAK6 271 aa13.01□□□□□ -0.33
SLC28A1-203ENST00000394573 LARP4BQ92615 738 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms