RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 CRLF3Q8IUI8 442 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 JDP2Q8WYK2 163 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 C20orf27Q9GZN8 174 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 CYP4F11Q9HBI6 524 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 E7ESA3 106 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 PGM3O95394 542 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 RALGPS1Q5JS13 557 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 SH2D5Q6ZV89 423 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 hCG_2014768A0A024R1R8 64 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 BUD23O43709 281 aaKnown RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 IL1R2P27930 398 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 AQP4P55087 323 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 DPYSL3Q14195 570 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 S100A14Q9HCY8 104 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 EXTL3O43909 919 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 UGT1A9O60656 530 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 LYPLA2O95372 231 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 TOP3BO95985 862 aaKnown RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 RBP3P10745 1247 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 SERPINB6P35237 376 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 GRIA2P42262 883 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 DLG1Q12959 904 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 PIGHQ14442 188 aaPredicted RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 DHDDSQ86SQ9 333 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 SPATA24Q86W54 205 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 OR5B17Q8NGF7 314 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 HSPH1Q92598 858 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 OLFM3Q96PB7 478 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 CCDC106Q9BWC9 280 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 UGT1A7Q9HAW7 530 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 UGT1A10Q9HAW8 530 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 UGT1A8Q9HAW9 530 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 LMCD1Q9NZU5 365 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 COMMD3-BMI1R4GMX3 469 aa17.1■□□□□ 0.33
EFEMP1-202ENST00000394555 A0A088AWK7 358 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 WDR64B1ANS9 1081 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 CALB1P05937 261 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 GARTP22102 1010 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 PEX2P28328 305 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TAF5Q15542 800 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 MMEL1Q495T6 779 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 FAXCQ5TGI0 409 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 PPP1R14CQ8TAE6 165 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 NAT14Q8WUY8 206 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 DTNBP1Q96EV8 351 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 HIC2Q96JB3 615 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TBC1D22BQ9NU19 505 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 GABBR1Q9UBS5 961 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 PLLPQ9Y342 182 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TOM1L1O75674 476 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 LSAMPQ13449 338 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 EFHC1Q5JVL4 640 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TTC39BQ5VTQ0 682 aaPredicted RBP17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 NPNTQ6UXI9 565 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 ACAD11Q709F0 780 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC26A11Q86WA9 606 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 EMC1Q8N766 993 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 KCTD6Q8NC69 237 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 MMP19Q99542 508 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 ADAMTS6Q9UKP5 1117 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 SOX13Q9UN79 622 aa17.09■□□□□ 0.33
EFEMP1-202ENST00000394555 CCDC160A6NGH7 325 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 STAM2O75886 525 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 KRT37O76014 449 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 STIP1P31948 543 aaKnown RBP17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 PSMD6Q15008 389 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 TRIP10Q15642 601 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 DARS2Q6PI48 645 aaKnown RBP17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 NME8Q8N427 588 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 SPATA18Q8TC71 538 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 GDPD5Q8WTR4 605 aa17.08■□□□□ 0.33
EFEMP1-202ENST00000394555 FAM172AQ8WUF8 416 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms