RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CACNA2D1P54289 1103 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 MYO1EQ12965 1108 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 DHCR24Q15392 516 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 MAPRE1Q15691 268 aaKnown RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 PEAR1Q5VY43 1037 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 SYCP3Q8IZU3 236 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 PHTF2Q8N3S3 785 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 RLN3Q8WXF3 142 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 PIGKQ92643 395 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 SCNM1Q9BWG6 230 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 MBD1Q9UIS9 605 aaPredicted RBP16.41■□□□□ 0.22
CHMP3-202ENST00000393773 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 LAMA5O15230 3695 aa16.41■□□□□ 0.22
CHMP3-202ENST00000393773 TMEM8BA6NDV4 472 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 F8VP50 259 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 TRIM66O15016 1216 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 ADAM23O75077 832 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 KAT7O95251 611 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 KLF8O95600 359 aaPredicted RBP16.4■□□□□ 0.22
CHMP3-202ENST00000393773 IDEP14735 1019 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 ANXA13P27216 316 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 GRIK1P39086 918 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 PTGER3P43115 390 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
CHMP3-202ENST00000393773 SLC6A11P48066 632 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 RESTQ13127 1097 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 HSF5Q4G112 596 aaPredicted RBP16.4■□□□□ 0.22
CHMP3-202ENST00000393773 TRIM61Q5EBN2 209 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 MDH1BQ5I0G3 518 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 RRAGBQ5VZM2 374 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 ARMCX6Q7L4S7 300 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 CBWD2Q8IUF1 395 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 ADGRG2Q8IZP9 1017 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 FRMD1Q8N878 549 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 DEFB124Q8NES8 71 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 WHAMMQ8TF30 809 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 CLIC6Q96NY7 704 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 TMEM74BQ9NUR3 256 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
CHMP3-202ENST00000393773 SRPRBQ9Y5M8 271 aaKnown RBP16.4■□□□□ 0.22
CHMP3-202ENST00000393773 ATXN2Q99700 1313 aaKnown RBP16.4■□□□□ 0.22
CHMP3-202ENST00000393773 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 TNFRSF10BO14763 440 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 KIAA0391O15091 583 aaKnown RBP16.39■□□□□ 0.21
CHMP3-202ENST00000393773 ALDH1A2O94788 518 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 PRPF6O94906 941 aaKnown RBP16.39■□□□□ 0.21
CHMP3-202ENST00000393773 TNNC2P02585 160 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 TIE1P35590 1138 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 PPP3CCP48454 512 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 KDSRQ06136 332 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 LMAN2Q12907 356 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 MAP7D1Q3KQU3 841 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 UAP1L1Q3KQV9 507 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 RHBDF2Q6PJF5 856 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 LPCAT2Q7L5N7 544 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 TTC30AQ86WT1 665 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 TMEFF1Q8IYR6 380 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 MYCBPAPQ8TBZ2 947 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 ZFRQ96KR1 1074 aaKnown RBP16.39■□□□□ 0.21
CHMP3-202ENST00000393773 SPACA7Q96KW9 195 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 C8orf48Q96LL4 319 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 PNKPQ96T60 521 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 MRPL45Q9BRJ2 306 aaKnown RBP16.39■□□□□ 0.21
CHMP3-202ENST00000393773 ZDHHC4Q9NPG8 344 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 CFAP97Q9P2B7 532 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
CHMP3-202ENST00000393773 LOC400499M0QZD8 3231 aa16.39■□□□□ 0.21
CHMP3-202ENST00000393773 A0A0A0MRY4 1105 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 SLC9A3R1O14745 358 aaPredicted RBP16.38■□□□□ 0.21
CHMP3-202ENST00000393773 ADH1CP00326 375 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 APODP05090 189 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 ADH5P11766 374 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 TXLNAP40222 546 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 TAF10Q12962 218 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 SYT12Q8IV01 421 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 WDR49Q8IV35 697 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 DPEP3Q9H4B8 488 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
CHMP3-202ENST00000393773 TCRBV21S2A2A0A5A6 115 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-202ENST00000393773 HOXB3P14651 431 aaPredicted RBP16.37■□□□□ 0.21
CHMP3-202ENST00000393773 ENGP17813 658 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 HOXD13P35453 343 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 STAT6P42226 847 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 MAPK8P45983 427 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 SURF1Q15526 300 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 SPDYCQ5MJ68 293 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 EOGTQ5NDL2 527 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 EMC10Q5UCC4 262 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 LYSMD4Q5XG99 296 aa16.37■□□□□ 0.21
CHMP3-202ENST00000393773 KIAA1211LQ6NV74 962 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms