RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 TTC25Q96NG3 672 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 PRPF18Q99633 342 aaKnown RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 TCHPQ9BT92 498 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 TIPINQ9BVW5 301 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 PHACTR1Q9C0D0 580 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 PDP2Q9P2J9 529 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 NRXN2Q9P2S2 1712 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 APRTP07741 180 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 MMP10P09238 476 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 SLC1A1P43005 524 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 CRKP46108 304 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 HADHBP55084 474 aaKnown RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 MYBPC3Q14896 1274 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 DNAJC24Q6P3W2 148 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 SCYL2Q6P3W7 929 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 DEFB107AQ8IZN7 70 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 NDUFAF2Q8N183 169 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 ZNF513Q8N8E2 541 aaPredicted RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 BBOF1Q8ND07 529 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 USP13Q92995 863 aaPredicted RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 MASTLQ96GX5 879 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 TMEM206Q9H813 350 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 TUFT1Q9NNX1 390 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 GPATCH2LQ9NWQ4 482 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 NXF1Q9UBU9 619 aaKnown RBP15.16■□□□□ 0.02
SFXN3-202ENST00000393459 GAKO14976 1311 aa15.16■□□□□ 0.02
SFXN3-202ENST00000393459 ADCY3O60266 1144 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 FOSP01100 380 aaPredicted RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 GSTA2P09210 222 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 PHBP35232 272 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 NLRP11P59045 1033 aaKnown RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 HIC1Q14526 733 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 FAM156AQ8NDB6 213 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CEP170P1Q96L14 293 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 E9PBE3 544 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 H7C0C1 242 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 TBX3O15119 743 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ALOX15BO15296 676 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ITM2AO43736 263 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 KLHL41O60662 606 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 SAT1P21673 171 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 FGFR3P22607 806 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ATP5OP48047 213 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CDK7P50613 346 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 SH3PXD2AQ5TCZ1 1133 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 FBXL19Q6PCT2 694 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ZNF276Q8N554 614 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 NAT14Q8WUY8 206 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 E2F7Q96AV8 911 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 HSPBAP1Q96EW2 488 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 MARK4Q96L34 752 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 TRAPPC9Q96Q05 1148 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 MMADHCQ9H3L0 296 aaPredicted RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 RAB6BQ9NRW1 208 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ZNF212Q9UDV6 495 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 MTO1Q9Y2Z2 717 aaKnown RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 LTBP1Q14766 1721 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 AIM2O14862 343 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ECE2O60344 883 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 MAPK10P53779 464 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CENPCQ03188 943 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 TRMT10BQ6PF06 316 aaKnown RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 DARS2Q6PI48 645 aaKnown RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 DCAKDQ8WVC6 231 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CHCHD3Q9NX63 227 aaKnown RBP15.15■□□□□ 0.02
SFXN3-202ENST00000393459 COL20A1Q9P218 1284 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 TBX20Q9UMR3 447 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 DOLKQ9UPQ8 538 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ACTL7BQ9Y614 415 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 CDK5RAP2Q96SN8 1893 aa15.15■□□□□ 0.02
SFXN3-202ENST00000393459 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 TFPTP0C1Z6 253 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 RBP3P10745 1247 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 PSMA2P25787 234 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 GTF2A2P52657 109 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 PKNOX1P55347 436 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 DYNC1I2Q13409 638 aaKnown RBP15.14■□□□□ 0.01
SFXN3-202ENST00000393459 CES3Q6UWW8 571 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 GSDMBQ8TAX9 411 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 FEZF2Q8TBJ5 459 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 FAF2Q96CS3 445 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 MBOAT7Q96N66 472 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 APOBEC3GQ9HC16 384 aaKnown RBP15.14■□□□□ 0.01
SFXN3-202ENST00000393459 TMEM8AQ9HCN3 771 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 RPS6KL1Q9Y6S9 549 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 MYH9P35579 1960 aaKnown RBP15.14■□□□□ 0.01
SFXN3-202ENST00000393459 TCEA3O75764 348 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 VCLP18206 1134 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 PMLP29590 882 aa15.14■□□□□ 0.01
SFXN3-202ENST00000393459 VCPP55072 806 aaKnown RBP15.14■□□□□ 0.01
SFXN3-202ENST00000393459 ZNF252P-AS1Q0IIN9 211 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms