RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RBM43Q6ZSC3 357 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TPRG1Q6ZUI0 275 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 MON1AQ86VX9 555 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TTC30AQ86WT1 665 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 MFSD6LQ8IWD5 586 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 NUP93Q8N1F7 819 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 PRSS33Q8NF86 280 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 FBXO32Q969P5 355 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 KREMEN1Q96MU8 473 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 NT5C1BQ96P26 610 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 HNRNPABQ99729 332 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 RNF38Q9H0F5 515 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 SAMSN1Q9NSI8 373 aaKnown RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 SMPD4Q9NXE4 827 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 GTSE1Q9NYZ3 720 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRPM5Q9NZQ8 1165 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 GCNT4Q9P109 453 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 TMEM63CQ9P1W3 806 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 CHORDC1Q9UHD1 332 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 AJAP1Q9UKB5 411 aaPredicted RBP8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 PCDHB4Q9Y5E5 795 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 MYO15AQ9UKN7 3530 aa8.12□□□□□ -1.11
HMGB3P1-201ENST00000393368 RNF225M0QZC1 329 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 PIK3R2O00459 728 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 PMM2O15305 246 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 MBD3O95983 291 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 GLULP15104 373 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARSAP15289 507 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 HDCP19113 662 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 SLC9A1P19634 815 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 AOC1P19801 751 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 DDX6P26196 483 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 YWHAQP27348 245 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 FCHO2Q0JRZ9 810 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 UBXN2BQ14CS0 331 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CAVIN1Q6NZI2 390 aaKnown RBP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 UBA3Q8TBC4 463 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 BPIFB1Q8TDL5 484 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 SH3RF2Q8TEC5 729 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 DEPDC1BQ8WUY9 529 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 TFAP2BQ92481 460 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZSWIM1Q9BR11 485 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 EBF3Q9H4W6 596 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 THAP9Q9H5L6 903 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CSNK1G1Q9HCP0 422 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 ACP6Q9NPH0 428 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 TDP1Q9NUW8 608 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 OSER1Q9NX31 292 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 TAB2Q9NYJ8 693 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 NUDT5Q9UKK9 219 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 TSPAN16Q9UKR8 245 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 NDRG2Q9UN36 371 aaKnown RBP8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 NFE2L3Q9Y4A8 694 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 CPQQ9Y646 472 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 WNT6Q9Y6F9 365 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 PIAS3Q9Y6X2 628 aa8.11□□□□□ -1.11
HMGB3P1-201ENST00000393368 COL4A2P08572 1712 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PTPRDP23468 1912 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PES1O00541 588 aaKnown RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MDM4O15151 490 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 CHADO15335 359 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 P4HA2O15460 535 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 COCHO43405 550 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 RTN3O95197 1032 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 TBX18O95935 607 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 OAS1P00973 400 aaKnown RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 USP17L7P0C7H9 530 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PNMA6AP0CW24 399 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 IRF1P10914 325 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MBL2P11226 248 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 KRT5P13647 590 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 TBXAS1P24557 533 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 BRD2P25440 801 aaKnown RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 TARSP26639 723 aaKnown RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 ERCC5P28715 1186 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 STARD6P59095 220 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 PFKPQ01813 784 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 CETN1Q12798 172 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 USP4Q13107 963 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 KCNJ12Q14500 433 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MTF1Q14872 753 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 ZNF77Q15935 545 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 STX1AQ16623 288 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MAN2A1Q16706 1144 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGAP44Q17R89 818 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 MIIPQ5JXC2 388 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 ARHGAP17Q68EM7 881 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 NAIF1Q69YI7 327 aaPredicted RBP8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRIM65Q6PJ69 517 aa8.1□□□□□ -1.11
HMGB3P1-201ENST00000393368 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms