RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 TTMPQ5BVD1 217 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 TFDP3Q5H9I0 405 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 TMC3Q7Z5M5 1100 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 HSPH1Q92598 858 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 EXOC4Q96A65 974 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 MED10Q9BTT4 135 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 UBN1Q9NPG3 1134 aa18.53■□□□□ 0.56
SHTN1-203ENST00000392901 KRT17Q04695 432 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 DHX9Q08211 1270 aaKnown RBP18.52■□□□□ 0.56
SHTN1-203ENST00000392901 GOLGA6L1Q8N7Z2 621 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 FBXO25Q8TCJ0 367 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 KHSRPQ92945 711 aaKnown RBP eCLIP18.52■□□□□ 0.561e-6■■■□□ 19.1
SHTN1-203ENST00000392901 LRRC45Q96CN5 670 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 FMO2Q99518 471 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 HNRNPABQ99729 332 aaKnown RBP18.52■□□□□ 0.56
SHTN1-203ENST00000392901 RGS18Q9NS28 235 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 SAGE1Q9NXZ1 904 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 PHF24Q9UPV7 400 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 hCG_1818297A0A087WSY0 165 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 CDKN2BP42772 138 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 BRCC3P46736 316 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 LHX1P48742 406 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 COPS2P61201 443 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 GRIK3Q13003 919 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 CCNG2Q16589 344 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 CCDC14Q49A88 953 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 ZNF598Q86UK7 904 aaKnown RBP18.52■□□□□ 0.56
SHTN1-203ENST00000392901 TMEM86AQ8N2M4 240 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 OR2W6PQ8NHA6 318 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 HAUS1Q96CS2 278 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 HOMER3Q9NSC5 361 aa18.52■□□□□ 0.56
SHTN1-203ENST00000392901 GOLGA8KD6RF30 607 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 BEST1O76090 585 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 TRUB2O95900 331 aaKnown RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 CD48P09326 243 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 FAM163BP0C2L3 166 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 SLC8A3P57103 927 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 TUSC3Q13454 348 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 TRIP13Q15645 432 aaPredicted RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 SCYL2Q6P3W7 929 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 PAQR9Q6ZVX9 377 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 PIGZQ86VD9 579 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 ZDHHC17Q8IUH5 632 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 ATL2Q8NHH9 583 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 UBLCP1Q8WVY7 318 aaPredicted RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 SYT15Q9BQS2 421 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 DUSP16Q9BY84 665 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 NGRNQ9NPE2 291 aaKnown RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 CRTAC1Q9NQ79 661 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 GOLGA6CA6NDK9 693 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 C3orf70A6NLC5 250 aaPredicted RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 GOLGA6DP0CG33 693 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 KDELR1P24390 212 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 SDC4P31431 198 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 PCK1P35558 622 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 SLC24A5Q71RS6 500 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 HSFY1Q96LI6 401 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 PEBP4Q96S96 227 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 GOLGA6AQ9NYA3 693 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 ATP8A1Q9Y2Q0 1164 aa18.51■□□□□ 0.55
SHTN1-203ENST00000392901 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.51■□□□□ 0.55
SHTN1-203ENST00000392901 MYBPHLA2RUH7 354 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 C9IYK1 514 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 H0YGN5 161 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 XPO1O14980 1071 aaKnown RBP18.5■□□□□ 0.55
SHTN1-203ENST00000392901 ACADSBP45954 432 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 LMAN1P49257 510 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 DYNLT1P63172 113 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 MTFR1Q15390 333 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 LRRC8DQ7L1W4 858 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 GRK7Q8WTQ7 553 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 LINC01599Q8WXQ3 324 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 SLCO2A1Q92959 643 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 TXLNGYQ9BZA5 131 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 ASIC3Q9UHC3 531 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 FEZ2Q9UHY8 353 aaPredicted RBP18.5■□□□□ 0.55
SHTN1-203ENST00000392901 NFS1Q9Y697 457 aa18.5■□□□□ 0.55
SHTN1-203ENST00000392901 PRPSAP2O60256 369 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 NPR3P17342 541 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 KCTD16Q68DU8 428 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 FAM172AQ8WUF8 416 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 NDRG1Q92597 394 aaKnown RBP18.49■□□□□ 0.55
SHTN1-203ENST00000392901 PSD3Q9NYI0 1048 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 F8W810 466 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 GAS8O95995 478 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 ITGB1P05556 798 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 ODC1P11926 461 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 RPL34P49207 117 aaKnown RBP18.49■□□□□ 0.55
SHTN1-203ENST00000392901 RABGGTBP53611 331 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 ADIGQ0VDE8 80 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 CEP85LQ5SZL2 805 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 CLEC20AQ6ZU45 233 aa18.49■□□□□ 0.55
SHTN1-203ENST00000392901 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
SHTN1-203ENST00000392901 PCED1BQ96HM7 432 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms