RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 FKTNO75072 461 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SEMA3DO95025 777 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CATP04040 527 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ADH1AP07327 375 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 NFICP08651 508 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SERPINF2P08697 491 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TGFB3P10600 412 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 COX7A2P14406 83 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZNF7P17097 686 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 VCAM1P19320 739 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 POLR2EP19388 210 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ACO1P21399 889 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 DNAJB2P25686 324 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 HOXC12P31275 282 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PTPN7P35236 360 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ARSEP51690 589 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PMS1P54277 932 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 PRKCEQ02156 737 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PTH1RQ03431 593 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RBL2Q08999 1139 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 DEFB115Q30KQ5 88 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 LVRNQ6Q4G3 990 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 FAM180AQ6UWF9 173 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 LRRC8AQ8IWT6 810 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 BEND7Q8N7W2 519 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RASGEF1AQ8N9B8 481 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RBBP8NLQ8NC74 664 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZFP28Q8NHY6 868 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 INPP5DQ92835 1189 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SGSM3Q96HU1 749 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ABHD16BQ9H3Z7 469 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ELOVL6Q9H5J4 265 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 VIPAS39Q9H9C1 493 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CYP3A43Q9HB55 503 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 AASDHPPTQ9NRN7 309 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 GGT7Q9UJ14 662 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TTC7AQ9ULT0 858 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 HPS5Q9UPZ3 1129 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ENTPD4Q9Y227 616 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 STARD13Q9Y3M8 1113 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ITSN2Q9NZM3 1697 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ABCA5Q8WWZ7 1642 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 GNG14A0A1W2PPG7 69 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PIPSLA2A3N6 862 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 UBE2Q2LH0YL09 131 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 NDUFB10O96000 172 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SNRPAP09012 282 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RBP1P09455 135 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 OR56A5P0C7T3 313 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ALPPL2P10696 532 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 NOS3P29474 1203 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SOX6P35712 828 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 MCAMP43121 646 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 GPD2P43304 727 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 NDUFV1P49821 464 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TBL3Q12788 808 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 NKX1-1Q15270 411 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZMYND11Q15326 602 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PCSK7Q16549 785 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PAN2Q504Q3 1202 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CEP78Q5JTW2 689 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 FBXL19Q6PCT2 694 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 BHLHB9Q6PI77 547 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RD3Q7Z3Z2 195 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TRMT11Q7Z4G4 463 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 FIBCD1Q8N539 461 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TBC1D16Q8TBP0 767 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 USP7Q93009 1102 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CXorf40BQ96DE9 158 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 RNFT2Q96EX2 444 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 C17orf80Q9BSJ5 609 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 BBS2Q9BXC9 721 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 FTHL17Q9BXU8 183 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SLC13A1Q9BZW2 595 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 REXO4Q9GZR2 422 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RANBP17Q9H2T7 1088 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 OSBPL3Q9H4L5 887 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SMYD3Q9H7B4 428 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PDGFCQ9NRA1 345 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 MRPL17Q9NRX2 175 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 SOHLH2Q9NX45 425 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZNF229Q9UJW7 825 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PNMA8BQ9ULN7 279 aaPredicted RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 ZNF232Q9UNY5 417 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CDYLQ9Y232 598 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 SLC27A6Q9Y2P4 619 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 ARL2BPQ9Y2Y0 163 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 THOC2Q8NI27 1593 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 RGS12O14924 1447 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 POTEMA6NI47 508 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CENPXA8MT69 81 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 TAF4O00268 1085 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 KPNA5O15131 536 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 EXTL3O43909 919 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 PQBP1O60828 265 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CNOT3O75175 753 aaKnown RBP4.12□□□□□ -1.75
UBR3-202ENST00000392632 CDH16O75309 829 aa4.12□□□□□ -1.75
UBR3-202ENST00000392632 CYP7B1O75881 506 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms