RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 BHMT2Q9H2M3 363 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 TRMT13Q9NUP7 481 aaKnown RBP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 LPAR3Q9UBY5 353 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 NOB1Q9ULX3 412 aaKnown RBP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 POC1B-GALNT4F8VUJ3 575 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 MOSPD3O75425 235 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 PRKCBP05771 671 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 DLDP09622 509 aaKnown RBP4.16□□□□□ -1.74
TRAV40-201ENST00000390467 RAB32Q13637 225 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 ODR4Q5SWX8 454 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 MAEAQ7L5Y9 396 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 BCDIN3DQ7Z5W3 292 aaKnown RBP4.16□□□□□ -1.74
TRAV40-201ENST00000390467 KCTD20Q7Z5Y7 419 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 CNGA4Q8IV77 575 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 GALNT4Q8N4A0 578 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 PPP2R3CQ969Q6 453 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 PUS7Q96PZ0 661 aaKnown RBP4.16□□□□□ -1.74
TRAV40-201ENST00000390467 CPNE7Q9UBL6 633 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 CDY1Q9Y6F8 540 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 ZNF521Q96K83 1311 aa4.16□□□□□ -1.74
TRAV40-201ENST00000390467 CAPN8A6NHC0 703 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
TRAV40-201ENST00000390467 TBC1D4O60343 1298 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 CTNND1O60716 968 aaKnown RBP4.15□□□□□ -1.75
TRAV40-201ENST00000390467 SRGAP2O75044 1071 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 BCAR3O75815 825 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 USP1O94782 785 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 SCGB1D2O95969 90 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 FGAP02671 866 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 ITGB6P18564 788 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 PTGER1P34995 402 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 BCAT1P54687 386 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 DAZAP2Q15038 168 aaPredicted RBP4.15□□□□□ -1.75
TRAV40-201ENST00000390467 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 Q4G0T1 1027 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 AWAT1Q58HT5 328 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 CERCAMQ5T4B2 595 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 SERPINA13PQ6UXR4 307 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 KIAA0319LQ8IZA0 1049 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 DENND1AQ8TEH3 1009 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 WDYHV1Q96HA8 205 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 ZNF518BQ9C0D4 1074 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 TMEM60Q9H2L4 133 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 DNMT3BQ9UBC3 853 aaKnown RBP4.15□□□□□ -1.75
TRAV40-201ENST00000390467 DRG1Q9Y295 367 aaKnown RBP4.15□□□□□ -1.75
TRAV40-201ENST00000390467 WDR17Q8IZU2 1322 aa4.15□□□□□ -1.75
TRAV40-201ENST00000390467 CACNA1IQ9P0X4 2223 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 CYP2D7A0A087X1C5 515 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 TRIM43BA6NCK2 446 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 E5RJQ4 531 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 FAM227AF5H4B4 570 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 H7C4K7 107 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 PMPCBO75439 489 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 CHRM5P08912 532 aaPredicted RBP4.14□□□□□ -1.75
TRAV40-201ENST00000390467 GKP32189 559 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 SUMO3P55854 103 aaPredicted RBP4.14□□□□□ -1.75
TRAV40-201ENST00000390467 LMAN2Q12907 356 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 CNN3Q15417 329 aaKnown RBP4.14□□□□□ -1.75
TRAV40-201ENST00000390467 CXorf57Q6NSI4 855 aaKnown RBP4.14□□□□□ -1.75
TRAV40-201ENST00000390467 MTHFD1LQ6UB35 978 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 SPARTQ8N0X7 666 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 TRIM43Q96BQ3 446 aaPredicted RBP4.14□□□□□ -1.75
TRAV40-201ENST00000390467 ZBTB9Q96C00 473 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 RSPRY1Q96DX4 576 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 FCRL4Q96PJ5 515 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 VPS16Q9H269 839 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 ELOVL5Q9NYP7 299 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 AMFRQ9UKV5 643 aa4.14□□□□□ -1.75
TRAV40-201ENST00000390467 MBD3L4A6NDZ8 208 aaPredicted RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 MBD3L3A6NE82 208 aaPredicted RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 AGPSO00116 658 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 PPEF2O14830 753 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 CD3EAPO15446 510 aaKnown RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SPRY2O43597 315 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 RRP9O43818 475 aaKnown RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 MYCLP12524 364 aaPredicted RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 APEHP13798 732 aaKnown RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 HGFP14210 728 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 IL1R1P14778 569 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 UQCRC1P31930 480 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 TIAL1Q01085 375 aaKnown RBP eCLIP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 CCNIQ14094 377 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 FAM187BQ17R55 369 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 PLEKHG6Q3KR16 790 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 CERKLQ49MI3 558 aaPredicted RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 C3orf38Q5JPI3 329 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 FAM102BQ5T8I3 360 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 CACHD1Q5VU97 1274 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 MIS18BP1Q6P0N0 1132 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SFTPA1Q8IWL2 248 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SIRT6Q8N6T7 355 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 SPSB4Q96A44 273 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 CTHRC1Q96CG8 243 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 ZBTB45Q96K62 511 aaPredicted RBP4.13□□□□□ -1.75
TRAV40-201ENST00000390467 PPP1R9BQ96SB3 815 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 EFHD1Q9BUP0 239 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 TRIM5Q9C035 493 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 WDR26Q9H7D7 661 aa4.13□□□□□ -1.75
TRAV40-201ENST00000390467 A1CFQ9NQ94 594 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms