RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 COBLL1Q53SF7 1204 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 ANKRD20A8PQ5CZ79 823 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 FAM47CQ5HY64 1035 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 GKAP1Q5VSY0 366 aaPredicted RBP7.95□□□□□ -1.14
TRBV28-201ENST00000390400 RINT1Q6NUQ1 792 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 C1orf186Q6ZWK4 172 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SESTD1Q86VW0 696 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 PHACTR4Q8IZ21 702 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 ZSWIM2Q8NEG5 633 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 MCPH1Q8NEM0 835 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 CAGE1Q8TC20 777 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 ZNF507Q8TCN5 953 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 LMBR1Q8WVP7 490 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 TRAPPC12Q8WVT3 735 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 STAMQ92783 540 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SPAG5Q96R06 1193 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 C7orf25Q9BPX7 421 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SH2D3AQ9BRG2 576 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 TIPINQ9BVW5 301 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SEZ6LQ9BYH1 1024 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 FAM129AQ9BZQ8 928 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 TRIM9Q9C026 710 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 THAP9Q9H5L6 903 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 CCDC134Q9H6E4 229 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 DHX33Q9H6R0 707 aaKnown RBP7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 GDF3Q9NR23 364 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 SETD4Q9NVD3 440 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 HDAC6Q9UBN7 1215 aa7.95□□□□□ -1.14
TRBV28-201ENST00000390400 NPHP3-ACAD11A0A0J9YXS1 232 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 MBLAC1A4D2B0 266 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ENO4A6NNW6 628 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 N4BP3O15049 544 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 SHOXO15266 292 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ASAP2O43150 1006 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 PJA2O43164 708 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 HIP1RO75146 1068 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 TIAF1O95411 115 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 IDEP14735 1019 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 CCND1P24385 295 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 KLRC1P26715 233 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 TMOD1P28289 359 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 HOXC8P31273 242 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 KRT9P35527 623 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 GMPRP36959 345 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ZBED6P86452 979 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ROR2Q01974 943 aaKnown RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 SOX4Q06945 474 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ZNF268Q14587 947 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 KCNB1Q14721 858 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 CFAP221Q4G0U5 840 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 TM4SF20Q53R12 229 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 CCDC122Q5T0U0 273 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 FAM102BQ5T8I3 360 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 CNNM4Q6P4Q7 775 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 MTHFD1LQ6UB35 978 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 LINC00114Q6XXX2 140 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 APBB1IPQ7Z5R6 666 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 METTL13Q8N6R0 699 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 DRAXINQ8NBI3 349 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 SPATA4Q8NEY3 305 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 RIN3Q8TB24 985 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 DIS3LQ8TF46 1054 aaKnown RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 LZICQ8WZA0 190 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ZBTB9Q96C00 473 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 VWCEQ96DN2 955 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 CYFIP2Q96F07 1278 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 REEP2Q9BRK0 252 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 NSRP1Q9H0G5 558 aaKnown RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 KLHL25Q9H0H3 589 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 POLR3FQ9H1D9 316 aaPredicted RBP7.94□□□□□ -1.14
TRBV28-201ENST00000390400 BLZF1Q9H2G9 400 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 FAM105AQ9NUU6 356 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 GTF2IRD1Q9UHL9 959 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 AP4E1Q9UPM8 1137 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 C15orf41Q9Y2V0 281 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 ACTL7BQ9Y614 415 aa7.94□□□□□ -1.14
TRBV28-201ENST00000390400 IGKV6-21A0A0C4DH24 114 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 MYO1FO00160 1098 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 ARVCFO00192 962 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 MAFO75444 373 aaPredicted RBP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 CST3P01034 146 aaPredicted RBP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 MYZAPP0CAP1 466 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 CYP2C9P11712 490 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 IBSPP21815 317 aaPredicted RBP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 ANXA13P27216 316 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 CASP1P29466 404 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 GBP1P32455 592 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 GCKP35557 465 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 FXR1P51114 621 aaKnown RBP eCLIP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 CLCN3P51790 818 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 COPB1P53618 953 aaKnown RBP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 TNNC1P63316 161 aa7.93□□□□□ -1.14
TRBV28-201ENST00000390400 MRPS35P82673 323 aaKnown RBP7.93□□□□□ -1.14
TRBV28-201ENST00000390400 ZNF200P98182 395 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms