RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FTH1P19P0C7X4 201 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PIM1P11309 404 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PHKG2P15735 406 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 CPEP16870 476 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 RHCEP18577 417 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 HDCP19113 662 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ADORA2AP29274 412 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PPIFP30405 207 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 HOXA11P31270 313 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 IL6STP40189 918 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ENTPD1P49961 510 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PRKAG1P54619 331 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 RRP1P56182 461 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 LOXL3P58215 753 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ERVK-21P61565 698 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SUMO2P61956 95 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 YPEL5P62699 121 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PSG6Q00889 435 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SATB1Q01826 763 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 DSC2Q02487 901 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 KRT17Q04695 432 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PPATQ06203 517 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 EXOSC9Q06265 439 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 TCF15Q12870 199 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 LMAN2Q12907 356 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 MYO1EQ12965 1108 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 KLF1Q13351 362 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SEC23BQ15437 767 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 INPP5JQ15735 1006 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF750Q32MQ0 723 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 KRT71Q3SY84 523 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SLC9C1Q4G0N8 1177 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 C4orf46Q504U0 113 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 TAF7LQ5H9L4 462 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 CC2D1BQ5T0F9 858 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 OTUD3Q5T2D3 398 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF324BQ6AW86 544 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ANO7Q6IWH7 933 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 DEF8Q6ZN54 512 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 DCDC5Q6ZRR9 648 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF329Q86UD4 541 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PPP1R3BQ86XI6 285 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 FAM90A1Q86YD7 464 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF280BQ86YH2 543 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SFTPA1Q8IWL2 248 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 HOMEZQ8IX15 550 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 FBXL14Q8N1E6 418 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM199Q8N511 208 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 GADD45GIP1Q8TAE8 222 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 MPLKIPQ8TAP9 179 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 NSUN6Q8TEA1 469 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PNISRQ8TF01 805 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM171Q8WVE6 324 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 OSCP1Q8WVF1 389 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SREK1Q8WXA9 508 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SOCS4Q8WXH5 440 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 NEUROG1Q92886 237 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ATP2A3Q93084 1043 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PPP2R3CQ969Q6 453 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 COA7Q96BR5 231 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 MED30Q96HR3 178 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 FAXDC2Q96IV6 333 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 FAM84BQ96KN1 310 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SLITRK1Q96PX8 696 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PRR25Q96S07 402 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SCNM1Q9BWG6 230 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 MYLK2Q9H1R3 596 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 MRPL46Q9H2W6 279 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 SEMA4BQ9NPR2 832 aaPredicted RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 GJB4Q9NTQ9 266 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZBTB40Q9NUA8 1239 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ASIC5Q9NY37 505 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 HESX1Q9UBX0 185 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ABCF2Q9UG63 623 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 ZDHHC8Q9ULC8 765 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 GABRQQ9UN88 632 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 COG5Q9UP83 839 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 POLHQ9Y253 713 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHA1Q9Y5I3 950 aa0.74□□□□□ -2.29
SNORD28-201ENST00000384706 CFAP20Q9Y6A4 193 aaKnown RBP0.74□□□□□ -2.29
SNORD28-201ENST00000384706 KIF26BQ2KJY2 2108 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TTBK1Q5TCY1 1321 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 A0A087WYN8 130 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TMEM272A0A1B0GTI8 110 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 A0A1W2PPC1 479 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TRIM75PA6NK02 468 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 H3BUI4 141 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MYO1CO00159 1063 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 NTN3O00634 580 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 TNFRSF13BO14836 293 aaPredicted RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 GPR39O43194 453 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CTIFO43310 598 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PCDHGA12O60330 932 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ZC3H11AO75152 810 aaKnown RBP eCLIP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 CNOT3O75175 753 aaKnown RBP0.73□□□□□ -2.29
SNORD28-201ENST00000384706 PMPCBO75439 489 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 ZNF432O94892 652 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 UNC5CO95185 931 aa0.73□□□□□ -2.29
SNORD28-201ENST00000384706 MT-CO1P00395 513 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms