RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 CNGA4Q8IV77 575 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 CEP295NLQ96MC4 621 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PCDHB18PQ96TA0 734 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 LRRC3Q9BY71 257 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PIDD1Q9HB75 910 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 PNPLA8Q9NP80 782 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SMN1-202ENST00000380707 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
SMN1-202ENST00000380707 SERPING1P05155 500 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 CSH1P0DML2 217 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 CSH2P0DML3 217 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 PTPN2P17706 415 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 RGS7P49802 495 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 KIF11P52732 1056 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 NTHL1P78549 312 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 TAF12Q16514 161 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 TMC8Q8IU68 726 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
SMN1-202ENST00000380707 DOCK6Q96HP0 2047 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 ZNF334Q9HCZ1 680 aaPredicted RBP13.36□□□□□ -0.27
SMN1-202ENST00000380707 IL37Q9NZH6 218 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 ARHGAP20Q9P2F6 1191 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 COG5Q9UP83 839 aa13.36□□□□□ -0.27
SMN1-202ENST00000380707 PIK3R2O00459 728 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 NRG2O14511 850 aaPredicted RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 RHOP08100 348 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 CDH5P33151 784 aaPredicted RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 CCR2P41597 374 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 TFF2Q03403 129 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 IFRD2Q12894 506 aaPredicted RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 PDCLQ13371 301 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 ATAT1Q5SQI0 421 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 CES5AQ6NT32 575 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 STK32AQ8WU08 396 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 CPA5Q8WXQ8 436 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 TRMT2BQ96GJ1 504 aaKnown RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 ST7Q9NRC1 585 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 IMPACTQ9P2X3 320 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
SMN1-202ENST00000380707 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 C2orf16Q68DN1 1984 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
SMN1-202ENST00000380707 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 FAM92AA1XBS5 289 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 GRXCR2A6NFK2 248 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 UNGP13051 313 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 LCP1P13796 627 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TKTL1P51854 596 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 EPHA5P54756 1037 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 NOMO3P69849 1222 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 SLC5A9Q2M3M2 681 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 PABPC1LQ4VXU2 614 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 TDRD12Q587J7 1177 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 GAREM2Q75VX8 874 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TMEM150AQ86TG1 271 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TMEM35BQ8NCS4 154 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 SUSD6Q92537 303 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TCEAL4Q96EI5 215 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 HSFY1Q96LI6 401 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 CPXM1Q96SM3 734 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 ZNHIT6Q9NWK9 470 aaKnown RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 TJP2Q9UDY2 1190 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 USP15Q9Y4E8 981 aaPredicted RBP13.34□□□□□ -0.27
SMN1-202ENST00000380707 CEP83Q9Y592 693 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TRIOO75962 3097 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 E5RJQ4 531 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 DDX3XO00571 662 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMN1-202ENST00000380707 F11P03951 625 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 USP17L7P0C7H9 530 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 MYL4P12829 197 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TNFAIP3P21580 790 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 YWHAQP27348 245 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 PGFP49763 221 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 TAF10Q12962 218 aa13.34□□□□□ -0.27
SMN1-202ENST00000380707 CLEC16AQ2KHT3 1053 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms