RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 COMMD3-BMI1R4GMX3 469 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 ATRNL1Q5VV63 1379 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 STAM2O75886 525 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 IL1R2P27930 398 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 CCND2P30279 289 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 MAN1A1P33908 653 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 GPX6P59796 221 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 SATL1Q86VE3 508 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 VPS52Q8N1B4 723 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13□□□□□ -0.33
PRPF40B-202ENST00000380281 EXD1Q8NHP7 514 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 MCUR1Q96AQ8 359 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 LENG1Q96BZ8 264 aaPredicted RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 PHF12Q96QT6 1004 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 INO80BQ9C086 356 aaPredicted RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 VWA5AO00534 786 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 RNASEH1O60930 286 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 DCTN3O75935 186 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 VAV1P15498 845 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 AMPD1P23109 780 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 PSMC1P62191 440 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 MOGSQ13724 837 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 IGDCC3Q8IVU1 814 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 TTLL6Q8N841 843 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 NAT14Q8WUY8 206 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 IP6K2Q9UHH9 426 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 MYH9P35579 1960 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 A0A0J9YVX5 310 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 H7C0C1 242 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 USP1O94782 785 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 BAG2O95816 211 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 MUTP22033 750 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 SFNP31947 248 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 ATP5OP48047 213 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 KDSRQ06136 332 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 PDCD7Q8N8D1 485 aaKnown RBP13□□□□□ -0.33
PRPF40B-202ENST00000380281 HIPK4Q8NE63 616 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 GRAMD1AQ96CP6 724 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 TTC1Q99614 292 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 MAD1L1Q9Y6D9 718 aa13□□□□□ -0.33
PRPF40B-202ENST00000380281 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 GYG2O15488 501 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM63AO94886 807 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 MT-ND3P03897 115 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 KRT3P12035 628 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 RGS7P49802 495 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 CDK7P50613 346 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 GALK1P51570 392 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 NR1H3Q13133 447 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 DARS2Q6PI48 645 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 ZCCHC23Q6ZST2 131 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 MARK2Q7KZI7 788 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 RNF149Q8NC42 400 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 MCPH1Q8NEM0 835 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 WRNIP1Q96S55 665 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 MRIQ9BWK5 157 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 ARL8BQ9NVJ2 186 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC4A7Q9Y6M7 1214 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 CYB561D2O14569 222 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 WDR46O15213 610 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 PSTPIP1O43586 416 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM191BP0C7N4 346 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 RBP3P10745 1247 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 ELK3P41970 407 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 GRIA2P42262 883 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 VCPP55072 806 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 CAV1Q03135 178 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF568Q3ZCX4 644 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 PPP6R3Q5H9R7 873 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 FYB2Q5VWT5 728 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 TMEM192Q8IY95 271 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 KIAA0319LQ8IZA0 1049 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 PRPF31Q8WWY3 499 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 AVENQ9NQS1 362 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF302Q9NR11 478 aa12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 TDRKHQ9Y2W6 561 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-202ENST00000380281 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 CLUHO75153 1309 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 CCDC160A6NGH7 325 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 GSC2O15499 205 aa12.98□□□□□ -0.33
PRPF40B-202ENST00000380281 LPXNO60711 386 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms