RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 DPEP3Q9H4B8 488 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 ZSCAN16Q9H4T2 348 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 BCCIPQ9P287 314 aaKnown RBP eCLIP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 NXF1Q9UBU9 619 aaKnown RBP24.61■■□□□ 1.53
U2AF1-202ENST00000380276 MTMR6Q9Y217 621 aa24.61■■□□□ 1.53
U2AF1-202ENST00000380276 A8MXQ7 604 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 CLDN5O00501 218 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 EIF3DO15371 548 aaKnown RBP eCLIP24.6■■□□□ 1.53
U2AF1-202ENST00000380276 APODP05090 189 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 PTPN1P18031 435 aaKnown RBP24.6■■□□□ 1.53
U2AF1-202ENST00000380276 BCKDHBP21953 392 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 SLC6A11P48066 632 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 NOP14P78316 857 aaKnown RBP24.6■■□□□ 1.53
U2AF1-202ENST00000380276 KDSRQ06136 332 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 FAM26FQ5R3K3 315 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 MDGA1Q8NFP4 955 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 CNOT6LQ96LI5 555 aaKnown RBP24.6■■□□□ 1.53
U2AF1-202ENST00000380276 PNKPQ96T60 521 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 TRIM9Q9C026 710 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 ZNF518BQ9C0D4 1074 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 ELOVL4Q9GZR5 314 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 AGPAT3Q9NRZ7 376 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 NME7Q9Y5B8 376 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 PTPRDP23468 1912 aa24.6■■□□□ 1.53
U2AF1-202ENST00000380276 EPG5Q9HCE0 2579 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 LNP1A1A4G5 178 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 PHACTR2O75167 634 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 KLF8O95600 359 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-202ENST00000380276 HOXD13P35453 343 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 CACNA2D1P54289 1103 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 MRPS21P82921 87 aaKnown RBP24.59■■□□□ 1.53
U2AF1-202ENST00000380276 PSMD6Q15008 389 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 CRY1Q16526 586 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 RASSF3Q86WH2 238 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 ALLCQ8N6M5 410 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 TXNDC5Q8NBS9 432 aaKnown RBP24.59■■□□□ 1.53
U2AF1-202ENST00000380276 PIGKQ92643 395 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 MED10Q9BTT4 135 aa24.59■■□□□ 1.53
U2AF1-202ENST00000380276 MORC2Q9Y6X9 1032 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-202ENST00000380276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-202ENST00000380276 PATE3B3GLJ2 98 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 SPTLC2O15270 562 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 MAP3K13O43283 966 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 TACC1O75410 805 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ADH1CP00326 375 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ADH5P11766 374 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 CYP24A1Q07973 514 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 GAB4Q2WGN9 574 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 DDX42Q86XP3 938 aaKnown RBP eCLIP24.58■■□□□ 1.53
U2AF1-202ENST00000380276 SFTPA1Q8IWL2 248 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ADGRG2Q8IZP9 1017 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 PGBD3Q8N328 593 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 XXYLT1Q8NBI6 393 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ZNF507Q8TCN5 953 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 RLN3Q8WXF3 142 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 FBXO32Q969P5 355 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 CUEDC2Q9H467 287 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 POLMQ9NP87 494 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ZDHHC4Q9NPG8 344 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 TMEM9BQ9NQ34 198 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 ARHGEF4Q9NR80 690 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 KBTBD4Q9NVX7 518 aa24.58■■□□□ 1.53
U2AF1-202ENST00000380276 KMT2BQ9UMN6 2715 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-202ENST00000380276 THADAQ6YHU6 1953 aa24.58■■□□□ 1.52
U2AF1-202ENST00000380276 GIPC1O14908 333 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 STX6O43752 255 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 KAT7O95251 611 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 OAS1P00973 400 aaKnown RBP24.57■■□□□ 1.52
U2AF1-202ENST00000380276 YWHAQP27348 245 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 NASPP49321 788 aaPredicted RBP24.57■■□□□ 1.52
U2AF1-202ENST00000380276 MYL6P60660 151 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 SHC2P98077 582 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 ZNF252P-AS1Q0IIN9 211 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 FOXC1Q12948 553 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 UAP1L1Q3KQV9 507 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 TMEM92Q6UXU6 159 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 ARMCX6Q7L4S7 300 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 C12orf40Q86WS4 652 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 NUP93Q8N1F7 819 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 LINC00301Q8NCQ3 95 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 B3GALNT2Q8NCR0 500 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 SPACA7Q96KW9 195 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 B3GNT5Q9BYG0 378 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 TFIP11Q9UBB9 837 aaKnown RBP24.57■■□□□ 1.52
U2AF1-202ENST00000380276 ATP8B3O60423 1300 aa24.57■■□□□ 1.52
U2AF1-202ENST00000380276 TGFB1I1O43294 461 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 OLFM2O95897 454 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 BIRC3Q13489 604 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 E2F4Q16254 413 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 EOGTQ5NDL2 527 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 EMC10Q5UCC4 262 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 EPM2AIP1Q7L775 607 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-202ENST00000380276 IQUBQ8NA54 791 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 PDZD8Q8NEN9 1154 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 ZNF396Q96N95 335 aaPredicted RBP24.56■■□□□ 1.52
U2AF1-202ENST00000380276 TMEM30AQ9NV96 361 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 SH3BP1Q9Y3L3 701 aa24.56■■□□□ 1.52
U2AF1-202ENST00000380276 MAP1BP46821 2468 aaKnown RBP24.56■■□□□ 1.52
U2AF1-202ENST00000380276 SGK1O00141 431 aa24.55■■□□□ 1.52
U2AF1-202ENST00000380276 RTN3O95197 1032 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms