RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MECRQ9BV79 373 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
SMAD9-202ENST00000379826 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 ZC3H11AO75152 810 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 TCN1P20061 433 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DYNC1I2Q13409 638 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DBN1Q16643 649 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 NFIL3Q16649 462 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DENND5BQ6ZUT9 1274 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 ARHGEF3Q9NR81 526 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CA12O43570 354 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 POU5F2Q8N7G0 328 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 GAS2L1Q99501 681 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 P2RX7Q99572 595 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 TMEM109Q9BVC6 243 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 ZCWPW1Q9H0M4 648 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 NMRK1Q9NWW6 199 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 BCAP29Q9UHQ4 241 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 AIM2O14862 343 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 EMC10Q5UCC4 262 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 C12orf50Q8NA57 414 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 APOPT1Q96IL0 206 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CAPNS2Q96L46 248 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 AGAP3Q96P47 875 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 FAM49BQ9NUQ9 324 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 TAGLN3Q9UI15 199 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 FAF1Q9UNN5 650 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 UBR2Q8IWV8 1755 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 KIF3CO14782 793 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 LGR5O75473 907 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 MX2P20592 715 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 BTKQ06187 659 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 C1QBPQ07021 282 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DACT2Q5SW24 774 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 DMAC2Q9NW81 257 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 SHOC2Q9UQ13 582 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 EDIL3O43854 480 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 OATP04181 439 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CFHP08603 1231 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 RPL10AP62906 217 aaKnown RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 PDE1CQ14123 709 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 ZNF268Q14587 947 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CDKL3Q8IVW4 592 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 TLK1Q9UKI8 766 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 CORO1CQ9ULV4 474 aaPredicted RBP11.84□□□□□ -0.51
SMAD9-202ENST00000379826 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
SMAD9-202ENST00000379826 FAM155BO75949 473 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 GPD1P21695 349 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 NME3Q13232 169 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 RNF220Q5VTB9 566 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PSPC1Q8WXF1 523 aaKnown RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ACAD9Q9H845 621 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 RSAD1Q9HA92 442 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 DNAJC16Q9Y2G8 782 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 NUB1Q9Y5A7 615 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 SNUPNO95149 360 aaKnown RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 STAT5BP51692 787 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 CYP1B1Q16678 543 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 TCHHL1Q5QJ38 904 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 BORCS6Q96GS4 357 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 CNBD2Q96M20 576 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 OLFM3Q96PB7 478 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 KLHL8Q9P2G9 620 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ACTL7BQ9Y614 415 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 UMODL1Q5DID0 1318 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 E7ENQ6 273 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 PDE5AO76074 875 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 TCF4P15884 667 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 MBOAT7Q96N66 472 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 SERPINI1Q99574 410 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 NUF2Q9BZD4 464 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 BCORQ6W2J9 1755 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ITGB3P05106 788 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 ATP6V1C1P21283 382 aa11.83□□□□□ -0.52
SMAD9-202ENST00000379826 POU5F1Q01860 360 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms