RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 AKAP5P24588 427 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 FDFT1P37268 417 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 FAM83EQ2M2I3 478 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 C11orf74Q86VG3 221 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 AHCYL2Q96HN2 611 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 SMG5Q9UPR3 1016 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 LRRC7Q96NW7 1537 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 SMAPO00193 183 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PSMD12O00232 456 aaPredicted RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TRIM16O95361 564 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 CXCL8P10145 99 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FGFR1P11362 822 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TGM2P21980 687 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 GEMIN4P57678 1058 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 BEX3Q00994 111 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 DENND5BQ6ZUT9 1274 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MYO1HQ8N1T3 1032 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 CDYLQ9Y232 598 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TSPAN3O60637 253 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MED24O75448 989 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PRIM2P49643 509 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 KCNK10P57789 538 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 SKOR1P84550 965 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 KDSRQ06136 332 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 C3orf62Q6ZUJ4 267 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 DSG4Q86SJ6 1040 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 C4orf33Q8N1A6 199 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PCYOX1LQ8NBM8 494 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 KCTD10Q9H3F6 313 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MRPS17Q9Y2R5 130 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TRPV2Q9Y5S1 764 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 ENO3P13929 434 aaPredicted RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 KRT20P35900 424 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 ANXA11P50995 505 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 SCNN1BP51168 640 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 ANO5Q75V66 913 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 DAGLBQ8NCG7 672 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MS4A14Q96JA4 679 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 SNRPAP09012 282 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PSMA3P25788 255 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PPIGQ13427 754 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FAXCQ5TGI0 409 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 FAM131BQ86XD5 332 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 KAT2BQ92831 832 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 CHP1Q99653 195 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 UTP6Q9NYH9 597 aaKnown RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MAP3K6O95382 1288 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 TGM3Q08188 693 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 MTF1Q14872 753 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PGM5Q15124 567 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 DPF2Q92785 391 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 PDGFCQ9NRA1 345 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 UXTQ9UBK9 157 aaPredicted RBP11.32□□□□□ -0.6
LINC00654-201ENST00000379053 ALG6Q9Y672 507 aa11.32□□□□□ -0.6
LINC00654-201ENST00000379053 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CRTAMO95727 393 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TNNI3P19429 210 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TRPC1P48995 793 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 FNDC3BQ53EP0 1204 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ACAD10Q6JQN1 1059 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ATP6V1G3Q96LB4 118 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 STOML1Q9UBI4 398 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NDOR1Q9UHB4 597 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 SNX12Q9UMY4 172 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NCF1BA6NI72 391 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NCF1CA8MVU1 366 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NDUFS2O75306 463 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CDH16O75309 829 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 NCF1P14598 390 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TCF3P15923 654 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 TROAPQ12815 778 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 PRKAA1Q13131 559 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 SERPINB4P48594 390 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 BST2Q10589 180 aaKnown RBP11.31□□□□□ -0.6
LINC00654-201ENST00000379053 HIC1Q14526 733 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
LINC00654-201ENST00000379053 CCDC33Q8N5R6 958 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms