RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 SSU72Q9NP77 194 aaKnown RBP20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 IRF6O14896 467 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 MCF2LO15068 1137 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 TARSP26639 723 aaKnown RBP20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 DPYSL3Q14195 570 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 KLHL38Q2WGJ6 581 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 SPATA18Q8TC71 538 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 TMEM237Q96Q45 408 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 CYLDQ9NQC7 956 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 SLC17A7Q9P2U7 560 aa20.41■□□□□ 0.86
SHROOM1-202ENST00000378676 WDR91A4D1P6 747 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 RNF8O76064 485 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 ZWINTO95229 277 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 IGBP1P78318 339 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 C15orf59Q2T9L4 293 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 MAP1SQ66K74 1059 aaPredicted RBP20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 CCDC62Q6P9F0 684 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 ZC3H18Q86VM9 953 aaKnown RBP20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 EXOC8Q8IYI6 725 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 CPB2Q96IY4 423 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 IFT122Q9HBG6 1241 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 SCN1AP35498 2009 aa20.4■□□□□ 0.86
SHROOM1-202ENST00000378676 C22orf31O95567 290 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 RNASELQ05823 741 aaKnown RBP20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 NOMO1Q15155 1222 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 VSIG1Q86XK7 387 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 PALM2Q8IXS6 379 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 ZNF276Q8N554 614 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 TCP10LQ8TDR4 215 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 OTUD5Q96G74 571 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 RNPEPQ9H4A4 650 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 ELP3Q9H9T3 547 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 EBF2Q9HAK2 575 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 PDGFCQ9NRA1 345 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 TXLNGQ9NUQ3 528 aa20.39■□□□□ 0.86
SHROOM1-202ENST00000378676 ELK3P41970 407 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 CDH6P55285 790 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 ROR1Q01973 937 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 SETDB1Q15047 1291 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 AMHR2Q16671 573 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 Q3C1V9 767 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 TLDC1Q6P9B6 456 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 PDIK1LQ8N165 341 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 BANPQ8N9N5 519 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 LRRC37BQ96QE4 947 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 PDZD7Q9H5P4 517 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 HAO1Q9UJM8 370 aa20.39■□□□□ 0.85
SHROOM1-202ENST00000378676 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 ENDOD1O94919 500 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 FAM183BPQ6ZVS7 135 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 AGGF1Q8N302 714 aaeCLIP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 HEXIM2Q96MH2 286 aaKnown RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 SMARCAD1Q9H4L7 1026 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 RSAD1Q9HA92 442 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 ASNSD1Q9NWL6 643 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 CSADQ9Y600 493 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 NUMBLQ9Y6R0 609 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 A0A087WZ62 844 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 KBTBD13C9JR72 458 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 HBP1O60381 514 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 GRAP2O75791 330 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 GPD1P21695 349 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 ZNF143P52747 638 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 CDO1Q16878 200 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 DARS2Q6PI48 645 aaKnown RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 GIMAP7Q8NHV1 300 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 RXFP2Q8WXD0 754 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 FDXACB1Q9BRP7 624 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 LRMDAQ9H2I8 198 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 NPHS2Q9NP85 383 aa20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 PRMT7Q9NVM4 692 aaPredicted RBP20.38■□□□□ 0.85
SHROOM1-202ENST00000378676 E5RJQ4 531 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 T-ENOLP0DO92 83 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 PCK1P35558 622 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 KCNJ11Q14654 390 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 SLC10A6Q3KNW5 377 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 PLEKHG4Q58EX7 1191 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 CLMNQ96JQ2 1002 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 DNAJC25-GNG10A0A024R161 153 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 A0A1B0GUA9 196 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 C2CD4BA6NLJ0 364 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 DCTN3O75935 186 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 TXNP10599 105 aaKnown RBP20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 VDRP11473 427 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 ELF1P32519 619 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 NDST1P52848 882 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 ACAP1Q15027 740 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 ZC3H12AQ5D1E8 599 aaKnown RBP20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 GJC2Q5T442 439 aaPredicted RBP20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 SMYD5Q6GMV2 418 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 N4BP2L2Q92802 583 aaPredicted RBP20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 PTPRN2Q92932 1015 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 ALG13Q9NP73 1137 aaKnown RBP20.37■□□□□ 0.85
SHROOM1-202ENST00000378676 AVILO75366 819 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms