RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ING5Q8WYH8 240 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 TASP1Q9H6P5 420 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 OBSL1O75147 1896 aa13.99□□□□□ -0.17
CKAP2-202ENST00000378034 F8VZ95 297 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 CYP26A1O43174 497 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 TPM3P06753 285 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 CLCN1P35523 988 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 USP46P62068 366 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 STKLD1Q8NE28 680 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 MCRS1Q96EZ8 462 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 NECAB3Q96P71 396 aaPredicted RBP13.98□□□□□ -0.17
CKAP2-202ENST00000378034 SPAG5Q96R06 1193 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 ZSWIM1Q9BR11 485 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 ANHXE9PGG2 379 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 THAP12O43422 761 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 GJA1P17302 382 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 PDE6CP51160 858 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 KIF11P52732 1056 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 JAM2P57087 298 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 PDE4CQ08493 712 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 TAF10Q12962 218 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 RAB41Q5JT25 222 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 GPR158Q5T848 1215 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 MON1AQ86VX9 555 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 FMNL3Q8IVF7 1028 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 KCTD13Q8WZ19 329 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 TRPV4Q9HBA0 871 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 LIMD1Q9UGP4 676 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 MYO6Q9UM54 1294 aa13.98□□□□□ -0.17
CKAP2-202ENST00000378034 M0QYV0 167 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 EPHB6O15197 1021 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 CBFA2T2O43439 604 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 STAT1P42224 750 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 SNX30Q5VWJ9 437 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 RNF135Q8IUD6 432 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 RNF214Q8ND24 703 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 SLC35F5Q8WV83 523 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 SMARCD2Q92925 531 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 ASB16Q96NS5 453 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 EDEM3Q9BZQ6 932 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 NLRC4Q9NPP4 1024 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 PCDHGC3Q9UN70 934 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 USP3Q9Y6I4 520 aa13.97□□□□□ -0.17
CKAP2-202ENST00000378034 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 NRG2O14511 850 aaPredicted RBP13.96□□□□□ -0.17
CKAP2-202ENST00000378034 TADA3O75528 432 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 SOX5P35711 763 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 CYP4F8P98187 520 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 HTR4Q13639 388 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 FIGNQ5HY92 759 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 CACNA2D4Q7Z3S7 1137 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 ZSCAN18Q8TBC5 510 aaPredicted RBP13.96□□□□□ -0.17
CKAP2-202ENST00000378034 STK32AQ8WU08 396 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 HSFY1Q96LI6 401 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 NUP58Q9BVL2 599 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 CD320Q9NPF0 282 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 IFNKQ9P0W0 207 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 C5orf42Q9H799 3197 aa13.96□□□□□ -0.17
CKAP2-202ENST00000378034 NUP210Q8TEM1 1887 aaPredicted RBP13.96□□□□□ -0.17
CKAP2-202ENST00000378034 ECI2O75521 394 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ZDHHC11BP0C7U3 371 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 PSEN1P49768 467 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.18
CKAP2-202ENST00000378034 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 GPRIN1Q7Z2K8 1008 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 SLC47A2Q86VL8 602 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ZNF677Q86XU0 584 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 SCML4Q8N228 414 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ELSPBP1Q96BH3 223 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ZSWIM3Q96MP5 696 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 LHX5Q9H2C1 402 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 KCNK12Q9HB15 430 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ZFP14Q9HCL3 533 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 CYLDQ9NQC7 956 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 TLR8Q9NR97 1041 aaKnown RBP13.96□□□□□ -0.18
CKAP2-202ENST00000378034 ANAPC1Q9H1A4 1944 aa13.96□□□□□ -0.18
CKAP2-202ENST00000378034 CALCAP01258 141 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 CCDC172P0C7W6 258 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 PNMA6AP0CW24 399 aaPredicted RBP13.95□□□□□ -0.18
CKAP2-202ENST00000378034 CYP11B1P15538 503 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 KRT9P35527 623 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 PBX1P40424 430 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 GPD2P43304 727 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 TUBP50607 506 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
CKAP2-202ENST00000378034 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms