RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 C2orf81A6NN90 581 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 ASS1P00966 412 aaKnown RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 CHN1P15882 459 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 EFEMP1Q12805 493 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 MRNIPQ6NTE8 343 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 TMC7Q7Z402 723 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 SZRD1Q7Z422 152 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 FAM131BQ86XD5 332 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 RNF217Q8TC41 542 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 CCDC78A2IDD5 438 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PMPCBO75439 489 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 AARSP49588 968 aaKnown RBP eCLIP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 RTP1P59025 263 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 GUCY1A3Q02108 690 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PLD1Q13393 1074 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 C2CD6Q53TS8 623 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 KCNT1Q5JUK3 1230 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 EFL1Q7Z2Z2 1120 aaKnown RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 C4orf33Q8N1A6 199 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 UBXN6Q9BZV1 441 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 ELOVL4Q9GZR5 314 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 CASS4Q9NQ75 786 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 TSR3Q9UJK0 312 aaKnown RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PQBP1O60828 265 aaKnown RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 APOA4P06727 396 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 AARS2Q5JTZ9 985 aaKnown RBP20.42■□□□□ 0.86
PCDH8-202ENST00000377942 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 DEFB128Q7Z7B8 93 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 APBA2Q99767 749 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 DUSP10Q9Y6W6 482 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 TAF11Q15544 211 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 UGT3A1Q6NUS8 523 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 TMEM39AQ9NV64 488 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 STOML1Q9UBI4 398 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 HMGCRP04035 888 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 EIF4BP23588 611 aaKnown RBP20.41■□□□□ 0.86
PCDH8-202ENST00000377942 HDAC4P56524 1084 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ACAP1Q15027 740 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 MTBPQ96DY7 904 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 PABPC3Q9H361 631 aaKnown RBP20.41■□□□□ 0.86
PCDH8-202ENST00000377942 BAZ2BQ9UIF8 2168 aaKnown RBP20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ZBTB39O15060 712 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 CCR1P32246 355 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 PRUNE1Q86TP1 453 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 LRRC6Q86X45 466 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ARHGEF19Q8IW93 802 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 EPN3Q9H201 632 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ETNK1Q9HBU6 452 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 OSGEPQ9NPF4 335 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ADA2Q9NZK5 511 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 SDR42E2A6NKP2 422 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 KDM1AO60341 852 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 TOMM70O94826 608 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ATXN8OSP0DMR3 200 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 SP3Q02447 781 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 TTLL9Q3SXZ7 439 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 SLC9A9Q8IVB4 645 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 HASPINQ8TF76 798 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 PRMT1Q99873 361 aaKnown RBP20.41■□□□□ 0.86
PCDH8-202ENST00000377942 DMAP1Q9NPF5 467 aaPredicted RBP20.41■□□□□ 0.86
PCDH8-202ENST00000377942 CRLS1Q9UJA2 301 aa20.41■□□□□ 0.86
PCDH8-202ENST00000377942 ABCC6O95255 1503 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 E2F6O75461 281 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 AMHP03971 560 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 SNHG28P0DPA3 235 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 GLRA2P23416 452 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 SLC29A2Q14542 456 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ZRANB3Q5FWF4 1079 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 MTMR14Q8NCE2 650 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 HIPK4Q8NE63 616 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 SMYD3Q9H7B4 428 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 NOP53Q9NZM5 478 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 TGM2P21980 687 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 WDR93Q6P2C0 686 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 UNC93AQ86WB7 457 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 WNK4Q96J92 1243 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ZBTB45Q96K62 511 aaPredicted RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ZIM3Q96PE6 472 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 XPO6Q96QU8 1125 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ALG13Q9NP73 1137 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 ZNF135P52742 658 aaPredicted RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 YWHAZP63104 245 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 DEFB115Q30KQ5 88 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 SYF2O95926 243 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 HNRNPH2P55795 449 aaKnown RBP20.4■□□□□ 0.86
PCDH8-202ENST00000377942 FOXR2Q6PJQ5 311 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 HOMEZQ8IX15 550 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 EMC1Q8N766 993 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 BRD8Q9H0E9 1235 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 LRRC40Q9H9A6 602 aa20.4■□□□□ 0.86
PCDH8-202ENST00000377942 SPDYE5A6NIY4 337 aa20.39■□□□□ 0.86
PCDH8-202ENST00000377942 LYPLA2O95372 231 aa20.39■□□□□ 0.86
PCDH8-202ENST00000377942 BTG3Q14201 252 aaPredicted RBP20.39■□□□□ 0.86
PCDH8-202ENST00000377942 SLC26A7Q8TE54 656 aa20.39■□□□□ 0.86
PCDH8-202ENST00000377942 RPS6KL1Q9Y6S9 549 aa20.39■□□□□ 0.86
PCDH8-202ENST00000377942 RTN3O95197 1032 aaPredicted RBP20.39■□□□□ 0.85
PCDH8-202ENST00000377942 AVPR1AP37288 418 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms