RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CERS6Q6ZMG9 384 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 MAP4K3Q8IVH8 894 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 EPB41L1Q9H4G0 881 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 NMRAL1Q9HBL8 299 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CHST12Q9NRB3 414 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 BARX2Q9UMQ3 279 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 AXIN2Q9Y2T1 843 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SUPT3HO75486 399 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF594Q96JF6 807 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ACSS3Q9H6R3 686 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 B2RBV5 119 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 LARGE1O95461 756 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RFTN1Q14699 578 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 METTL7BQ6UX53 244 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 KRT73Q86Y46 540 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GJD3Q8N144 294 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GALNT15Q8N3T1 639 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RDH13Q8NBN7 331 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RNF34Q969K3 372 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CXCR5P32302 372 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF844Q08AG5 666 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CUL2Q13617 745 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SPANXN3Q5MJ09 141 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CROTQ9UKG9 612 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GCATO75600 419 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GRM3Q14832 879 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ARHGAP44Q17R89 818 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TXNRD3Q86VQ6 643 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 BLOC1S5Q8TDH9 187 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ACAD9Q9H845 621 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 HMG20AQ9NP66 347 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 HSPBP1Q9NZL4 362 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 WDR91A4D1P6 747 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 WNT7AO00755 349 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PPP3CCP48454 512 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 EFTUD2Q15029 972 aaKnown RBP eCLIP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CDKL4Q5MAI5 379 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PIWIL2Q8TC59 973 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RACGAP1Q9H0H5 632 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ATF5Q9Y2D1 282 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 MYRFQ9Y2G1 1151 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CCT8P50990 548 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SLC12A3P55017 1021 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 UNC45BQ8IWX7 931 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 COL6A1P12109 1028 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D10CQ8IV04 446 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RAD21L1Q9H4I0 556 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ACOT9Q9Y305 439 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ACKR2O00590 384 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RALBP11234 206 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 AOC1P19801 751 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 GNA15P30679 374 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CEBPAP49715 358 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 YWHAGP61981 247 aaKnown RBP eCLIP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CSTF3Q12996 717 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 COQ5Q5HYK3 327 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 WDR59Q6PJI9 974 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SLC4A11Q8NBS3 891 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 KCTD10Q9H3F6 313 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 L3MBTL1Q9Y468 752 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 DENND3A2RUS2 1198 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ALADP13716 330 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 S100A5P33763 92 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF143P52747 638 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 NFE2Q16621 373 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF280CQ8ND82 737 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CNDP2Q96KP4 475 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 LACRTQ9GZZ8 138 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 COMMD8Q9NX08 183 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 POLG2Q9UHN1 485 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 FCER1AP12319 257 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 CD19P15391 556 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM44Q2T9K0 475 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PLEKHA7Q6IQ23 1121 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 LUZP2Q86TE4 346 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 BAP1Q92560 729 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PHTF1Q9UMS5 762 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 NDUFAF1Q9Y375 327 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 HDAC3O15379 428 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SPOCK2Q92563 424 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ROPN1LQ96C74 230 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 KCNH7Q9NS40 1196 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SNX5Q9Y5X3 404 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PRMT5O14744 637 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SLITRK3O94933 977 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ABCB1P08183 1280 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 COMTP21964 271 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 PSMC4P43686 418 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SCNN1GP51170 649 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 C6orf89Q6UWU4 347 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 MRPL57Q9BQC6 102 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF341Q9BYN7 854 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF446Q9NWS9 450 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 NR2E3Q9Y5X4 410 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 TUBA3EQ6PEY2 450 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RTL10Q7L3V2 364 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 C9orf16Q9BUW7 83 aa5.12□□□□□ -1.59
PCDH9-201ENST00000377861 NIFKQ9BYG3 293 aaKnown RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 RBAKQ9NYW8 714 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-201ENST00000377861 SEPT9Q9UHD8 586 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms