RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FBXO41Q8TF61 875 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 TWNKQ96RR1 684 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 WRNIP1Q96S55 665 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 SDCBP2Q9H190 292 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 SYNCQ9H7C4 482 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 AFG3L2Q9Y4W6 797 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 TEX264Q9Y6I9 313 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 A6NHS1 94 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 GSC2O15499 205 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 PRKCBP05771 671 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 PDHA1P08559 390 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 LINGO3P0C6S8 592 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 NEFHP12036 1026 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 ICAM3P32942 547 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 ZNF200P98182 395 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CDK16Q00536 496 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 RINLQ6ZS11 566 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CHSY1Q86X52 802 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 DCLRE1BQ9H816 532 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 ZFATQ9P243 1243 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 USP18Q9UMW8 372 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 KAT6AQ92794 2004 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 IQANK1A0A1B0GTG1 560 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 KRT36O76013 467 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 FARP2O94887 1054 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 INHBAP08476 426 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 KRT19P08727 400 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 SLC18A2Q05940 514 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 ACSBG2Q5FVE4 666 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 RNF149Q8NC42 400 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 SH3TC2Q8TF17 1288 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 LHX5Q9H2C1 402 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 CNTN3Q9P232 1028 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 HACL1Q9UJ83 578 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 IKBKGQ9Y6K9 419 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 HNRNPCL1O60812 293 aaKnown RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 MAFO75444 373 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 GCKP35557 465 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 TUBP50607 506 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 STAT5BP51692 787 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 ROR1Q01973 937 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
ACTN1-202ENST00000376839 TMEM192Q8IY95 271 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 CFAP36Q96G28 342 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 MECRQ9BV79 373 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 PICK1Q9NRD5 415 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 NRBP2Q9NSY0 501 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 NMRK1Q9NWW6 199 aa13.8□□□□□ -0.2
ACTN1-202ENST00000376839 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 PIK3R2O00459 728 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 GYG2O15488 501 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 B4GALT5O43286 388 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 DNAJC6O75061 913 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 C1QAP02745 245 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 GJB1P08034 283 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 MYL2P10916 166 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 TSHRP16473 764 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 SERPINB4P48594 390 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 LAMTOR4Q0VGL1 99 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 RCN1Q15293 331 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 ALYREFQ86V81 257 aaKnown RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 TRIM50Q86XT4 487 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 DNAJC9Q8WXX5 260 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 TAS2R1Q9NYW7 299 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 MGAMO43451 1857 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 EFNA5P52803 228 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 NOMO1Q15155 1222 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 FAXCQ5TGI0 409 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 TRNP1Q6NT89 227 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 CYP4V2Q6ZWL3 525 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 LRRN4Q8WUT4 740 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 NRG4Q8WWG1 115 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
ACTN1-202ENST00000376839 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 MTO1Q9Y2Z2 717 aaKnown RBP13.79□□□□□ -0.2
ACTN1-202ENST00000376839 DPPA5A6NC42 116 aa13.78□□□□□ -0.2
ACTN1-202ENST00000376839 CXorf49A8MYA2 514 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-202ENST00000376839 TRIM49D1C9J1S8 452 aa13.78□□□□□ -0.2
ACTN1-202ENST00000376839 FCHO1O14526 889 aa13.78□□□□□ -0.2
ACTN1-202ENST00000376839 MICAL2O94851 1124 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms