RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SCARA5Q6ZMJ2 495 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 TMEM30AQ9NV96 361 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 CEP250Q9BV73 2442 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 CACNA1AO00555 2505 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 CCDC163A0A0D9SF12 145 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 PDXKO00764 312 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 C4BPAP04003 597 aaKnown RBP22.37■■□□□ 1.17
VSX1-201ENST00000376707 NR3C1P04150 777 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 RAP1GAPP47736 663 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 SLC7A9P82251 487 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 NUP93Q8N1F7 819 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 CAMKK1Q8N5S9 505 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 FAM160A2Q8N612 972 aaPredicted RBP22.37■■□□□ 1.17
VSX1-201ENST00000376707 RPLP0P6Q8NHW5 317 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 GAB3Q8WWW8 586 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 TNIP3Q96KP6 325 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 MED10Q9BTT4 135 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 KCTD10Q9H3F6 313 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 SEMA4GQ9NTN9 838 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 CPQQ9Y646 472 aa22.37■■□□□ 1.17
VSX1-201ENST00000376707 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.37■■□□□ 1.17
VSX1-201ENST00000376707 A0A1W2PQ27 194 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 A0A1W2PQ64 194 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 A0A1W2PQD8 194 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 RPP40O75818 363 aaKnown RBP22.36■■□□□ 1.17
VSX1-201ENST00000376707 RTN3O95197 1032 aaPredicted RBP22.36■■□□□ 1.17
VSX1-201ENST00000376707 CCDC192P0DO97 292 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 P4HA1P13674 534 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 YWHAQP27348 245 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 SYKP43405 635 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 NDUFA8P51970 172 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 ATXN1P54253 815 aaKnown RBP22.36■■□□□ 1.17
VSX1-201ENST00000376707 ZXDBP98169 803 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 RNF38Q9H0F5 515 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 SMPD4Q9NXE4 827 aa22.36■■□□□ 1.17
VSX1-201ENST00000376707 KIF20AO95235 890 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 VNN1O95497 513 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 OLFM2O95897 454 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 OAS1P00973 400 aaKnown RBP22.35■■□□□ 1.17
VSX1-201ENST00000376707 RPN1P04843 607 aaKnown RBP22.35■■□□□ 1.17
VSX1-201ENST00000376707 DLG4P78352 724 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 CSRP2Q16527 193 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 CEP135Q66GS9 1140 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 FILIP1Q7Z7B0 1213 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 FAM35AQ86V20 835 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 PDZD8Q8NEN9 1154 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 CCDC26Q8TAB7 109 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 FBXO32Q969P5 355 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 CCDC47Q96A33 483 aaKnown RBP22.35■■□□□ 1.17
VSX1-201ENST00000376707 ACDQ96AP0 544 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 ELMO3Q96BJ8 720 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 HHIPQ96QV1 700 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 RTKNQ9BST9 563 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 POLR3BQ9NW08 1133 aaPredicted RBP22.35■■□□□ 1.17
VSX1-201ENST00000376707 FRMD4BQ9Y2L6 1034 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 DNAH14Q0VDD8 3507 aa22.35■■□□□ 1.17
VSX1-201ENST00000376707 PTPRDP23468 1912 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 GREB1Q4ZG55 1949 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 SLC9A3R1O14745 358 aaPredicted RBP22.34■■□□□ 1.17
VSX1-201ENST00000376707 CALUO43852 315 aaPredicted RBP22.34■■□□□ 1.17
VSX1-201ENST00000376707 MBL2P11226 248 aaPredicted RBP22.34■■□□□ 1.17
VSX1-201ENST00000376707 SGSM1Q2NKQ1 1148 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 PRR23CQ6ZRP0 262 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 SYT13Q7L8C5 426 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 CACNA2D4Q7Z3S7 1137 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 DDX42Q86XP3 938 aaKnown RBP eCLIP22.34■■□□□ 1.17
VSX1-201ENST00000376707 KIAA1958Q8N8K9 716 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 TMC2Q8TDI7 906 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 EZH1Q92800 747 aaPredicted RBP22.34■■□□□ 1.17
VSX1-201ENST00000376707 KCNK16Q96T55 309 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 SDCBP2Q9H190 292 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 DMAP1Q9NPF5 467 aaPredicted RBP22.34■■□□□ 1.17
VSX1-201ENST00000376707 CFAP97Q9P2B7 532 aa22.34■■□□□ 1.17
VSX1-201ENST00000376707 ANAPC1Q9H1A4 1944 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 AXIN1O15169 862 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 FOXD2O60548 495 aaPredicted RBP22.33■■□□□ 1.17
VSX1-201ENST00000376707 DMC1Q14565 340 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 ZACNQ401N2 412 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 ACOT1Q86TX2 421 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 NETO1Q8TDF5 533 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 OVCA2Q8WZ82 227 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 TAF4BQ92750 862 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 SMARCD1Q96GM5 515 aa22.33■■□□□ 1.17
VSX1-201ENST00000376707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.32■■□□□ 1.16
VSX1-201ENST00000376707 SCAMP3O14828 347 aaKnown RBP22.32■■□□□ 1.16
VSX1-201ENST00000376707 AP1G2O75843 785 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 AKAP3O75969 853 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 CYP17A1P05093 508 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 OPRD1P41143 372 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 PIK3CAP42336 1068 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 SLC5A3P53794 718 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 DPYDQ12882 1025 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 KRBA2Q6ZNG9 492 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 PAQR9Q6ZVX9 377 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 SV2AQ7L0J3 742 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 KBTBD6Q86V97 674 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 LOXL4Q96JB6 756 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 KRT82Q9NSB4 513 aa22.32■■□□□ 1.16
VSX1-201ENST00000376707 CHORDC1Q9UHD1 332 aaPredicted RBP22.32■■□□□ 1.16
VSX1-201ENST00000376707 TRAF3IP3Q9Y228 551 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms