RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 C10orf120Q5SQS8 335 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 MDM1Q8TC05 714 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 CHORDC1Q9UHD1 332 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 MYH7P12883 1935 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 FAM237AA0A1B0GTK4 181 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 APOA4P06727 396 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 SLC12A3P55017 1021 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 KCNA1Q09470 495 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 MKRN4PQ13434 485 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 IKBKEQ14164 716 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
MDC1-201ENST00000376406 CHI3L2Q15782 390 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 SETD3Q86TU7 594 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 CBWD1Q9BRT8 395 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 DCDC2Q9UHG0 476 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 VWA5AO00534 786 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 TRIM66O15016 1216 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 HDAC4P56524 1084 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 PTENP60484 403 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 UNC45BQ8IWX7 931 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 CEP70Q8NHQ1 597 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 MTMR12Q9C0I1 747 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 TRPM5Q9NZQ8 1165 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 PCDHGB4Q9UN71 923 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 PKP3Q9Y446 797 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 NRCAMQ92823 1304 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 RIC1Q4ADV7 1423 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 IGF2BP3O00425 579 aaKnown RBP eCLIP11.39□□□□□ -0.59
MDC1-201ENST00000376406 C1QTNF7Q9BXJ2 289 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 VDRP11473 427 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 MTFR1Q15390 333 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 RGMBQ6NW40 437 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 UBXN6Q9BZV1 441 aa11.39□□□□□ -0.59
MDC1-201ENST00000376406 SCHIP1Q9P0W5 487 aaPredicted RBP11.39□□□□□ -0.59
MDC1-201ENST00000376406 PJA2O43164 708 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 KDELC2Q7Z4H8 507 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 TLK2Q86UE8 772 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 OOSP2Q86WS3 158 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ADAM33Q9BZ11 813 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.38□□□□□ -0.59
MDC1-201ENST00000376406 RAB21Q9UL25 225 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 A0A087X0B3 334 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 NAPEPLDQ6IQ20 393 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 MYCBPAPQ8TBZ2 947 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 LACRTQ9GZZ8 138 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 PHTF1Q9UMS5 762 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 O00370 1275 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 NDUFS3O75489 264 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 PYGLP06737 847 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 SHMT1P34896 483 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 MCL1Q07820 350 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 LBRQ14739 615 aaKnown RBP11.38□□□□□ -0.59
MDC1-201ENST00000376406 TTLL9Q3SXZ7 439 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 THEMIS2Q5TEJ8 643 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ABI2Q9NYB9 513 aaPredicted RBP11.38□□□□□ -0.59
MDC1-201ENST00000376406 F5H5T6 163 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ANXA9O76027 345 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 NFIAQ12857 509 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 CCNJLQ8IV13 435 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 LRRC34Q8IZ02 419 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 SLC5A5Q92911 643 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 FBXO32Q969P5 355 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 RNF208Q9H0X6 261 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ARHGAP26Q9UNA1 814 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 UMODL1Q5DID0 1318 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 CAND2O75155 1236 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 ZNF135P52742 658 aaPredicted RBP11.38□□□□□ -0.59
MDC1-201ENST00000376406 PTK6Q13882 451 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 CES5AQ6NT32 575 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 FAM117BQ6P1L5 589 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 FBXO16Q8IX29 292 aaPredicted RBP11.38□□□□□ -0.59
MDC1-201ENST00000376406 NMRK1Q9NWW6 199 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 MARCOQ9UEW3 520 aaPredicted RBP11.38□□□□□ -0.59
MDC1-201ENST00000376406 PIK3C2AO00443 1686 aa11.38□□□□□ -0.59
MDC1-201ENST00000376406 GOLGA8TH3BQL2 631 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
MDC1-201ENST00000376406 ASMTLO95671 621 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 KCNA2P16389 499 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
MDC1-201ENST00000376406 CCNG2Q16589 344 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 MAP1SQ66K74 1059 aaPredicted RBP11.37□□□□□ -0.59
MDC1-201ENST00000376406 APBB2Q92870 758 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 WDCPQ9H6R7 721 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 OSGEPQ9NPF4 335 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 CNTFP26441 200 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 GRIK4Q16099 956 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 PCYOX1LQ8NBM8 494 aa11.37□□□□□ -0.59
MDC1-201ENST00000376406 TMA16Q96EY4 203 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms