RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 GZF1Q9H116 711 aaPredicted RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 SMOC1Q9H4F8 434 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 KIAA1586Q9HCI6 787 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 FBRSL1Q9HCM7 1045 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 ABCB6Q9NP58 842 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 DUS2Q9NX74 493 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 CTNND2Q9UQB3 1225 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 PLXND1Q9Y4D7 1925 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 TMEM8BA6NDV4 472 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 NOL4O94818 638 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 USP17L7P0C7H9 530 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 TCF3P15923 654 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 NR2F2P24468 414 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 LRRC63Q05C16 580 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 USP4Q13107 963 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 NR1H3Q13133 447 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 PAK1Q13153 545 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 SNRNP35Q16560 246 aaKnown RBP12.98□□□□□ -0.33
LSM2-208ENST00000375661 FOXR2Q6PJQ5 311 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 EFCAB13Q8IY85 973 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 KDF1Q8NAX2 398 aaPredicted RBP12.98□□□□□ -0.33
LSM2-208ENST00000375661 RIN3Q8TB24 985 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 SPATA18Q8TC71 538 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 PLEKHO2Q8TD55 490 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
LSM2-208ENST00000375661 TSG101Q99816 390 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 ACBD6Q9BR61 282 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 RBAKQ9NYW8 714 aaPredicted RBP12.98□□□□□ -0.33
LSM2-208ENST00000375661 ABCA7Q8IZY2 2146 aa12.98□□□□□ -0.33
LSM2-208ENST00000375661 CFAP47Q6ZTR5 3102 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 TRAV19A0A0A6YYK7 116 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 LNP1A1A4G5 178 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 C4orf47A7E2U8 309 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 KHNYNO15037 678 aaKnown RBP12.97□□□□□ -0.33
LSM2-208ENST00000375661 IL18RAPO95256 599 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 CEACAM1P13688 526 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 PFKLP17858 780 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
LSM2-208ENST00000375661 RPL13P26373 211 aaKnown RBP12.97□□□□□ -0.33
LSM2-208ENST00000375661 IFNAR2P48551 515 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 ZNF77Q15935 545 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 USP39Q53GS9 565 aaKnown RBP12.97□□□□□ -0.33
LSM2-208ENST00000375661 CEP135Q66GS9 1140 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 PMS2CLQ68D20 193 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 TCEAL6Q6IPX3 200 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 SASS6Q6UVJ0 657 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 EEF2KMTQ96G04 330 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 FAM84AQ96KN4 292 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 TMEM9BQ9NQ34 198 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 RWDD2AQ9UIY3 292 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 MAGED2Q9UNF1 606 aaPredicted RBP12.97□□□□□ -0.33
LSM2-208ENST00000375661 CHD6Q8TD26 2715 aa12.97□□□□□ -0.33
LSM2-208ENST00000375661 CEP192Q8TEP8 1941 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 FAM208BQ5VWN6 2430 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 DCLK1O15075 740 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 CETN3O15182 167 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 MAPK13O15264 365 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 TADA3O75528 432 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 GBP1P32455 592 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 PDE6CP51160 858 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 DGKEP52429 567 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 FKBP3Q00688 224 aaKnown RBP12.96□□□□□ -0.33
LSM2-208ENST00000375661 MYL7Q01449 175 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 TYRO3Q06418 890 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 PSMD6Q15008 389 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 EML3Q32P44 896 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 CFAP221Q4G0U5 840 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 INTS6LQ5JSJ4 861 aaKnown RBP12.96□□□□□ -0.33
LSM2-208ENST00000375661 RASSF3Q86WH2 238 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 TSTD1Q8NFU3 115 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 EZH1Q92800 747 aaPredicted RBP12.96□□□□□ -0.33
LSM2-208ENST00000375661 FUBP3Q96I24 572 aaKnown RBP eCLIP12.96□□□□□ -0.33
LSM2-208ENST00000375661 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
LSM2-208ENST00000375661 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 ZMIZ1Q9ULJ6 1067 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 WASF3Q9UPY6 502 aa12.96□□□□□ -0.33
LSM2-208ENST00000375661 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 SYCE3A1L190 88 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 HUS1O60921 280 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 NFATC1O95644 943 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 CKMP06732 381 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 C1QTNF9P0C862 333 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 ERCC5P28715 1186 aaPredicted RBP12.95□□□□□ -0.34
LSM2-208ENST00000375661 GPR15P49685 360 aa12.95□□□□□ -0.34
LSM2-208ENST00000375661 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms