RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 AAGABQ6PD74 315 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 LVRNQ6Q4G3 990 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 DPP9Q86TI2 863 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 MORC4Q8TE76 937 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PTPN18Q99952 460 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 KLHL4Q9C0H6 718 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 KCTD10Q9H3F6 313 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 COG5Q9UP83 839 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 TDRKHQ9Y2W6 561 aaKnown RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 TCRBV7S2A1N4TA0A589 114 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 GOLGA8IPA6NC78 632 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 GOLGA8JA6NMD2 632 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 TP73O15350 636 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 CBFA2T3O75081 653 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ARIH2O95376 493 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ABHD2P08910 425 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 CHRNB2P17787 502 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 OAZ1P54368 228 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 C4orf33Q8N1A6 199 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 TMEM143Q96AN5 459 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 SKA1Q96BD8 255 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 MTBPQ96DY7 904 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 CFAP57Q96MR6 1250 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 KANSL3Q9P2N6 904 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 AJAP1Q9UKB5 411 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PPM1HQ9ULR3 514 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 E9PBE3 544 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ADCY3O60266 1144 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 KCNA2P16389 499 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 RARRES1P49788 294 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 OVGP1Q12889 678 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 SGO2Q562F6 1265 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 ANO5Q75V66 913 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 DHDDSQ86SQ9 333 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 BBS5Q8N3I7 341 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 C9orf72Q96LT7 481 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PANX3Q96QZ0 392 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 KCNH4Q9UQ05 1017 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
C9orf3-203ENST00000375315 NOP56O00567 594 aaKnown RBP12.67□□□□□ -0.38
C9orf3-203ENST00000375315 TM7SF2O76062 418 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 ADCY8P40145 1251 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 SPIDRQ14159 915 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 LPIN1Q14693 890 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 DNAL1Q4LDG9 190 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 PRAMEF19Q5SWL8 479 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.67□□□□□ -0.38
C9orf3-203ENST00000375315 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 FAM172AQ8WUF8 416 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 KIAA1586Q9HCI6 787 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 C15orf38-AP3S2A0A0A6YYH1 394 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 KANSL1LA0AUZ9 987 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 H3BRJ5 948 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 COMTP21964 271 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 UBA1P22314 1058 aaKnown RBP12.67□□□□□ -0.38
C9orf3-203ENST00000375315 PIK3CAP42336 1068 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 ERFP50548 548 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 PSMC5P62195 406 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 IRX4P78413 519 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 TBL3Q12788 808 aaKnown RBP12.67□□□□□ -0.38
C9orf3-203ENST00000375315 PTK6Q13882 451 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 LRRC36Q1X8D7 754 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 HSDL1Q3SXM5 330 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 CYP4F22Q6NT55 531 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 TDRPQ86YL5 185 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 GPRC5AQ8NFJ5 357 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 TRAPPC12Q8WVT3 735 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 FBXO6Q9NRD1 293 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-203ENST00000375315 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
C9orf3-203ENST00000375315 POC1B-GALNT4F8VUJ3 575 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 TRMUO75648 421 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 SMIM18P0DKX4 95 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 ADORA2AP29274 412 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 GEMIN4P57678 1058 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PLCB3Q01970 1234 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PRKCEQ02156 737 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 MESDQ14696 234 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PKN2Q16513 984 aaKnown RBP12.66□□□□□ -0.38
C9orf3-203ENST00000375315 MAPK6Q16659 721 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 SFT2D3Q587I9 215 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 Q6ZNX1 250 aa12.66□□□□□ -0.38
C9orf3-203ENST00000375315 PRUNE1Q86TP1 453 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms