RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 PPARGC1AQ9UBK2 798 aaKnown RBP22.06■■□□□ 1.12
UPF3A-202ENST00000375299 KRT7P08729 469 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 KDELR1P24390 212 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 TAZQ16635 292 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 TRIM42Q8IWZ5 723 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 THNSL1Q8IYQ7 743 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 ZBTB45Q96K62 511 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-202ENST00000375299 NDE1Q9NXR1 346 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 DNAJB4Q9UDY4 337 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 PPME1Q9Y570 386 aa22.06■■□□□ 1.12
UPF3A-202ENST00000375299 SPECC1L-ADORA2AF8WAN1 911 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 SPAG6O75602 509 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 IL1R2P27930 398 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 ACTR3P61158 418 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 YWHAGP61981 247 aaKnown RBP eCLIP22.05■■□□□ 1.12
UPF3A-202ENST00000375299 AP2B1P63010 937 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 DPYSL3Q14195 570 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 HSF5Q4G112 596 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-202ENST00000375299 DNAL1Q4LDG9 190 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 KCNT1Q5JUK3 1230 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 GPAT2Q6NUI2 795 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 CDHR3Q6ZTQ4 885 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 ULK2Q8IYT8 1036 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 FAM71DQ8N9W8 422 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 ECSITQ9BQ95 431 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 CYP26B1Q9NR63 512 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 TAGLN3Q9UI15 199 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 TEX264Q9Y6I9 313 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 SIP14410 1827 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 LRCH4O75427 683 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 STAM2O75886 525 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 LDHAP00338 332 aaKnown RBP22.05■■□□□ 1.12
UPF3A-202ENST00000375299 MDH1BQ5I0G3 518 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 TTC39BQ5VTQ0 682 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-202ENST00000375299 SCARA3Q6AZY7 606 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 WDTC1Q8N5D0 677 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 RNF217Q8TC41 542 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 IMPG2Q9BZV3 1241 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 WWP1Q9H0M0 922 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-202ENST00000375299 CNTNAP2Q9UHC6 1331 aa22.05■■□□□ 1.12
UPF3A-202ENST00000375299 CRABP2P29373 138 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 EIF3EP60228 445 aaKnown RBP22.04■■□□□ 1.12
UPF3A-202ENST00000375299 BST1Q10588 318 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 HADHQ16836 314 aaKnown RBP22.04■■□□□ 1.12
UPF3A-202ENST00000375299 ARHGEF16Q5VV41 709 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 ATG16L1Q676U5 607 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 SLFN12LQ6IEE8 588 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 SWSAP1Q6NVH7 229 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 ARFGAP1Q8N6T3 406 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 DDX50Q9BQ39 737 aaKnown RBP22.04■■□□□ 1.12
UPF3A-202ENST00000375299 MSTO1Q9BUK6 570 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 CCDC28BQ9BUN5 200 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 SLC9A2Q9UBY0 812 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 TRIM49D1C9J1S8 452 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 PIGRP01833 764 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 CDH5P33151 784 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-202ENST00000375299 SLC26A11Q86WA9 606 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 RFX6Q8HWS3 928 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 ARID3BQ8IVW6 561 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-202ENST00000375299 ARHGAP18Q8N392 663 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 AZIN2Q96A70 460 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 CLPTM1LQ96KA5 538 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 GORASP1Q9BQQ3 440 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 THTPAQ9BU02 230 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 MECRQ9BV79 373 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 GPAMQ9HCL2 828 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 SLC7A8Q9UHI5 535 aa22.04■■□□□ 1.12
UPF3A-202ENST00000375299 RNF8O76064 485 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 CD48P09326 243 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 ZCCHC18P0CG32 403 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 RFC1P35251 1148 aaPredicted RBP22.03■■□□□ 1.12
UPF3A-202ENST00000375299 TMPRSS15P98073 1019 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 PRKCEQ02156 737 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 KDSRQ06136 332 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 E2F7Q96AV8 911 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 PNPLA8Q9NP80 782 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 KIAA1217Q5T5P2 1943 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 DOCK5Q9H7D0 1870 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 APOC4-APOC2K7ER74 178 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 MCF2LO15068 1137 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 FAM155BO75949 473 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 APOC2P02655 101 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 WEE2P0C1S8 567 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 EIF4BP23588 611 aaKnown RBP22.03■■□□□ 1.12
UPF3A-202ENST00000375299 CDK18Q07002 472 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 DYNC1I2Q13409 638 aaKnown RBP22.03■■□□□ 1.12
UPF3A-202ENST00000375299 ZNF394Q53GI3 561 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 FKBP1CQ5VVH2 108 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 PRPF39Q86UA1 669 aaKnown RBP22.03■■□□□ 1.12
UPF3A-202ENST00000375299 ACAP3Q96P50 834 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 SLC38A10Q9HBR0 1119 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 KCNG1Q9UIX4 513 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 PLLPQ9Y342 182 aa22.03■■□□□ 1.12
UPF3A-202ENST00000375299 ASS1P00966 412 aaKnown RBP22.02■■□□□ 1.12
UPF3A-202ENST00000375299 PSAPP07602 524 aa22.02■■□□□ 1.12
UPF3A-202ENST00000375299 RBP3P10745 1247 aa22.02■■□□□ 1.12
UPF3A-202ENST00000375299 NRLP54845 237 aa22.02■■□□□ 1.12
UPF3A-202ENST00000375299 CUL3Q13618 768 aa22.02■■□□□ 1.12
UPF3A-202ENST00000375299 TBCCQ15814 346 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms