RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 DNASE1L2Q92874 299 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KAT5Q92993 513 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SECISBP2LQ93073 1101 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ELSPBP1Q96BH3 223 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TCEAL4Q96EI5 215 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FAXDC2Q96IV6 333 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 UROC1Q96N76 676 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CORO1BQ9BR76 489 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GPR88Q9GZN0 384 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 APOBEC3GQ9HC16 384 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TRMT1Q9NXH9 659 aaKnown RBP11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GDE1Q9NZC3 331 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ITGA11Q9UKX5 1188 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 AGAP1Q9UPQ3 857 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PPP2R2CQ9Y2T4 447 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ADGRG1Q9Y653 693 aa11.63□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SMIM28A0A1B0GU29 152 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ARHGEF37A1IGU5 675 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NCAM2O15394 837 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CLSTN1O94985 981 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 IPO7O95373 1038 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SEC24AO95486 1093 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ITGB3P05106 788 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PLEKP08567 350 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CYP3A5P20815 502 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ANXA13P27216 316 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CCR2P41597 374 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NOP14P78316 857 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ADCY1Q08828 1119 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CUL2Q13617 745 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SPA17Q15506 151 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ASTE1Q2TB18 679 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TDRD12Q587J7 1177 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SCARA3Q6AZY7 606 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SPOPLQ6IQ16 392 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SLC8B1Q6J4K2 584 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 FAM71AQ8IYT1 594 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF687Q8N1G0 1237 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SHC3Q92529 594 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ELMO3Q96BJ8 720 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NELL2Q99435 816 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 DESI2Q9BSY9 194 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 BRD9Q9H8M2 597 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CYP4F11Q9HBI6 524 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 AVENQ9NQS1 362 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SPTLC3Q9NUV7 552 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GMEB2Q9UKD1 530 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MRPS17Q9Y2R5 130 aaKnown RBP11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 INSL5Q9Y5Q6 135 aa11.62□□□□□ -0.55
HLA-DQA1-202ENST00000374949 NCANO14594 1321 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 DCDC2BA2VCK2 349 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GOLGA6L9A6NEM1 432 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PODXLO00592 558 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TRAPPC3O43617 180 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 LCA5LO95447 670 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 STAU1O95793 577 aaKnown RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TDGF1P13385 188 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PTPN2P17706 415 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TNFAIP3P21580 790 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TGM1P22735 817 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 POLR2BP30876 1174 aaKnown RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ELF1P32519 619 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CLCN1P35523 988 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KIF11P52732 1056 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 BPIFB4P59827 614 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PTK2Q05397 1052 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 MYO1EQ12965 1108 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF699Q32M78 642 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF667Q5HYK9 610 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 VITQ6UXI7 678 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PDZD4Q76G19 769 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF571Q7Z3V5 609 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 VPS36Q86VN1 386 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZNF461Q8TAF7 563 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CXorf38Q8TB03 319 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 HPDLQ96IR7 371 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CHRDQ9H2X0 955 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ZFP14Q9HCL3 533 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PCDHB4Q9Y5E5 795 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 USP24Q9UPU5 2620 aa11.61□□□□□ -0.55
HLA-DQA1-202ENST00000374949 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 PRR5-ARHGAP8B1AHC4 643 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 CYP26A1O43174 497 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 TBC1D4O60343 1298 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 ABLIM3O94929 683 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 KRT5P13647 590 aa11.6□□□□□ -0.55
HLA-DQA1-202ENST00000374949 P4HA1P13674 534 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms