RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LPIN1Q14693 890 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SMTNL2Q2TAL5 461 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CYP4V2Q6ZWL3 525 aaPredicted RBP18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ZNF365Q70YC5 407 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLC26A9Q7LBE3 791 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TMEM86AQ8N2M4 240 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TTC13Q8NBP0 860 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 LPIN3Q9BQK8 851 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TSPYL1Q9H0U9 437 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 EPB41L4BQ9H329 900 aa18.88■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MOXD2PA6NHM9 499 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PIK3R2O00459 728 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ITGAVP06756 1048 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ADORA2BP29275 332 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 VCPP55072 806 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DMTNQ08495 405 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ZNF844Q08AG5 666 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 OASLQ15646 514 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CCDC14Q49A88 953 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CEP85LQ5SZL2 805 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLC2A14Q8TDB8 520 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 LPPQ93052 612 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PEBP4Q96S96 227 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TMBIM4Q9HC24 238 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DNPEPQ9ULA0 475 aa18.87■□□□□ 0.61
HLA-DQB1-201ENST00000374943 A0A0U1RQF3 1178 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MGEA5O60502 916 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GHRP10912 638 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SKIP12755 728 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 RARGP13631 454 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DESP17661 470 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PTPN9P43378 593 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ARSEP51690 589 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KCNT1Q5JUK3 1230 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 VSIG1Q86XK7 387 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ALLCQ8N6M5 410 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SLC35B2Q8TB61 432 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TEKT4Q8WW24 435 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SENP8Q96LD8 212 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TBCBQ99426 244 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TSEN34Q9BSV6 310 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 OSBPL7Q9BZF2 842 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PCSK1NQ9UHG2 260 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PTPRDP23468 1912 aa18.86■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GOLGA6L10A6NI86 522 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HMGB1P1B2RPK0 211 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TKTP29401 623 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SDC4P31431 198 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 C15orf59Q2T9L4 293 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 WSCD1Q658N2 575 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SCUBE3Q8IX30 993 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 KCTD6Q8NC69 237 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SPATA18Q8TC71 538 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ATP6V1G3Q96LB4 118 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 FAM118BQ9BPY3 351 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 C11orf84Q9BUA3 381 aaPredicted RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 RSAD1Q9HA92 442 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TRMT13Q9NUP7 481 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 NOD1Q9Y239 953 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PRPSAP2O60256 369 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GRAP2O75791 330 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 MYZAPP0CAP1 466 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PTPN1P18031 435 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PAX3P23760 479 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ADCY8P40145 1251 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 LHX1P48742 406 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SCNN1GP51170 649 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CLCNKBP51801 687 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 AFF1P51825 1210 aaKnown RBP18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 ITGA8P53708 1063 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TAF5Q15542 800 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 SH3PXD2AQ5TCZ1 1133 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 EMC10Q5UCC4 262 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DUSP16Q9BY84 665 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PATJQ8NI35 1801 aa18.85■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DNAH12Q6ZR08 3092 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 INPPL1O15357 1258 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CST8O60676 142 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TRPA1O75762 1119 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PLCB3Q01970 1234 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 PDK2Q15119 407 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TRIP13Q15645 432 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 UPP1Q16831 310 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 BOLA3Q53S33 107 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 DENND2CQ68D51 928 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 TRMT10CQ7L0Y3 403 aaKnown RBP18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GSTA5Q7RTV2 222 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 HSPH1Q92598 858 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CENPIQ92674 756 aaPredicted RBP18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 CFAP57Q96MR6 1250 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 GLT1D1Q96MS3 346 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 B3GNT5Q9BYG0 378 aa18.84■□□□□ 0.61
HLA-DQB1-201ENST00000374943 FOXP3Q9BZS1 431 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms