RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 NCOR1O75376 2440 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 LCP1P13796 627 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 FERP16591 822 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 HMGA1P17096 107 aaKnown RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 PPP3CCP48454 512 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 JAM2P57087 298 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SNX16P57768 344 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 TAF10Q12962 218 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 TEAD2Q15562 447 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 ASIC2Q16515 512 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 GPR158Q5T848 1215 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SFMBT2Q5VUG0 894 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SARM1Q6SZW1 724 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 PIGZQ86VD9 579 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 TMC8Q8IU68 726 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 PASD1Q8IV76 773 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 ADHFE1Q8IWW8 467 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 ZMIZ2Q8NF64 920 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SCAMP5Q8TAC9 235 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SYNCQ9H7C4 482 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 TMEM30AQ9NV96 361 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 CDH7Q9ULB5 785 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 MYO6Q9UM54 1294 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 USTQ9Y2C2 406 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 LUC7L2Q9Y383 392 aaKnown RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 ZFP37Q9Y6Q3 630 aaPredicted RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 C2orf16Q68DN1 1984 aa16.07■□□□□ 0.16
PFDN6-202ENST00000374607 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
PFDN6-202ENST00000374607 REV3LO60673 3130 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 ITIH6Q6UXX5 1313 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 LRRC53A6NM62 1247 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 BMP1P13497 986 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 CEBPBP17676 345 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 RGS7P49802 495 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 EPHA5P54756 1037 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 USP46P62068 366 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 CYP4F8P98187 520 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 TRIM14Q14142 442 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 SLC5A9Q2M3M2 681 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 PRSS36Q5K4E3 855 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 DENND1BQ6P3S1 775 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 ZNF677Q86XU0 584 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 DRC7Q8IY82 874 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 SHKBP1Q8TBC3 707 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 FGF13Q92913 245 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 MYRFLQ96LU7 910 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 NACA2Q9H009 215 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 TLR8Q9NR97 1041 aaKnown RBP16.06■□□□□ 0.16
PFDN6-202ENST00000374607 GDE1Q9NZC3 331 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
PFDN6-202ENST00000374607 PTPRDP23468 1912 aa16.06■□□□□ 0.16
PFDN6-202ENST00000374607 VCANP13611 3396 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.162e-8■■■□□ 14.6
PFDN6-202ENST00000374607 AVPR1AP37288 418 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 CCR2P41597 374 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 ACADSBP45954 432 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 PLA2G4AP47712 749 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 TKTL1P51854 596 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 ADIGQ0VDE8 80 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 GAREM2Q75VX8 874 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 MAB21L3Q8N8X9 362 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 TMEM35BQ8NCS4 154 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 OVCA2Q8WZ82 227 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 MYADMQ96S97 322 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 ZSWIM1Q9BR11 485 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 LRRC3Q9BY71 257 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 ZMYM5Q9UJ78 669 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 PCDHGC3Q9UN70 934 aa16.05■□□□□ 0.16
PFDN6-202ENST00000374607 A0A1W2PQJ5 194 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 HHLA1C9JL84 531 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 TULP2O00295 520 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 PIK3R2O00459 728 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 DPYSL4O14531 572 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 TNFRSF10BO14763 440 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 F11P03951 625 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 MMEP08473 750 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 USP17L7P0C7H9 530 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 LAMP2P13473 410 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 PBX1P40424 430 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 KIF11P52732 1056 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 MEA1Q16626 185 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 MTSS1LQ765P7 747 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 GPRIN1Q7Z2K8 1008 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 NOP9Q86U38 636 aaKnown RBP16.04■□□□□ 0.16
PFDN6-202ENST00000374607 NPAS3Q8IXF0 933 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 ARHGAP18Q8N392 663 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 TTC16Q8NEE8 873 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
PFDN6-202ENST00000374607 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms