RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 RHDQ02161 417 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 NR1H3Q13133 447 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 TARDBPQ13148 414 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC8-204ENST00000373560 RTP5Q14D33 572 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-204ENST00000373560 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC8-204ENST00000373560 TMEM134Q9H6X4 195 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 TMEM206Q9H813 350 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
HDAC8-204ENST00000373560 SPTAN1Q13813 2472 aaKnown RBP13.24□□□□□ -0.29
HDAC8-204ENST00000373560 STK36Q9NRP7 1315 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
HDAC8-204ENST00000373560 TRIM24O15164 1050 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 MED24O75448 989 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 USP17L7P0C7H9 530 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 GNSP15586 552 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
HDAC8-204ENST00000373560 IL9RQ01113 521 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 RESTQ13127 1097 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 DHCR24Q15392 516 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-204ENST00000373560 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 Q6ZUG5 572 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 DNASE2BQ8WZ79 361 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 FGF11Q92914 225 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 TMEM176AQ96HP8 235 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-204ENST00000373560 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 RAD54BQ9Y620 910 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
HDAC8-204ENST00000373560 KNTC1P50748 2209 aa13.23□□□□□ -0.29
HDAC8-204ENST00000373560 PHLPP2Q6ZVD8 1323 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 MEI4A8MW99 385 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 LEFTY2O00292 366 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 MCF2P10911 925 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 JUPP14923 745 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 GCFC2P16383 781 aaKnown RBP13.22□□□□□ -0.29
HDAC8-204ENST00000373560 CYP11B2P19099 503 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC8-204ENST00000373560 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 DDR2Q16832 855 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 HES3Q5TGS1 186 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 KIAA1614Q5VZ46 1190 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 PIK3AP1Q6ZUJ8 805 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 MED8Q96G25 268 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 SNX11Q9Y5W9 270 aa13.22□□□□□ -0.29
HDAC8-204ENST00000373560 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 A0A0A0MRY4 1105 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 NDUFS2O75306 463 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 GP1BBP13224 206 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 NCAM1P13591 858 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 TCF3P15923 654 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-204ENST00000373560 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 WDR45BQ5MNZ6 344 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 MPZL3Q6UWV2 235 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 C1orf216Q8TAB5 229 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
HDAC8-204ENST00000373560 TSC1Q92574 1164 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 LGMNQ99538 433 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
HDAC8-204ENST00000373560 MYMKA6NI61 221 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 K7ERI5 159 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 NOL4O94818 638 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 ODC1P11926 461 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 GRIA2P42262 883 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 CSNK1EP49674 416 aaKnown RBP13.2□□□□□ -0.3
HDAC8-204ENST00000373560 EFNA5P52803 228 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 LILRA4P59901 499 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 NFATC3Q12968 1075 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 KIF19Q2TAC6 998 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 KCNT1Q5JUK3 1230 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 DCAF12L1Q5VU92 463 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 KIAA1324Q6UXG2 1013 aaKnown RBP13.2□□□□□ -0.3
HDAC8-204ENST00000373560 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-204ENST00000373560 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 SLFN12Q8IYM2 578 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 ADGRG2Q8IZP9 1017 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 SPPL2BQ8TCT7 592 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 MRGPRX1Q96LB2 322 aa13.2□□□□□ -0.3
HDAC8-204ENST00000373560 GPR174Q9BXC1 333 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms