RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PTPN18Q99952 460 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 APOL6Q9BWW8 343 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 GCOM2Q9BZD3 368 aaPredicted RBP19.61■□□□□ 0.73
USP49-202ENST00000373010 IQCA1LA6NCM1 817 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 HCRTO43612 131 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 RBP3P10745 1247 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 CCDC14Q49A88 953 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 ANKRD20A8PQ5CZ79 823 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 IQSEC1Q6DN90 963 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 SLC27A1Q6PCB7 646 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 NAT8LQ8N9F0 302 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 LENG1Q96BZ8 264 aaPredicted RBP19.61■□□□□ 0.73
USP49-202ENST00000373010 RSAD1Q9HA92 442 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 FGFR1OP2Q9NVK5 253 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 GPATCH2LQ9NWQ4 482 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 GJD2Q9UKL4 321 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 RALGAPA2Q2PPJ7 1873 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 H0YHG0 523 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 SMIM10L2AP0DMW4 78 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 SMIM10L2BP0DMW5 78 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 GPX6P59796 221 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 PCGF5Q86SE9 256 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 ZC3H18Q86VM9 953 aaKnown RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 TTC39CQ8N584 583 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 CKAP2Q8WWK9 683 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 ADAM33Q9BZ11 813 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 NXF3Q9H4D5 531 aaKnown RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 MCF2LO15068 1137 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 PRPSAP2O60256 369 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 ENDOD1O94919 500 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 DPYSL3Q14195 570 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 PKN2Q16513 984 aaKnown RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 PKDCCQ504Y2 493 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 SCYL2Q6P3W7 929 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 PNMA8AQ86V59 439 aaPredicted RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 SCUBE3Q8IX30 993 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 RIBC1Q8N443 379 aaPredicted RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 MAK16Q9BXY0 300 aaKnown RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 NSRP1Q9H0G5 558 aaKnown RBP19.6■□□□□ 0.73
USP49-202ENST00000373010 PLEKHA5Q9HAU0 1116 aa19.6■□□□□ 0.73
USP49-202ENST00000373010 RRN3P2A6NIE6 340 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 CCT8L1PA6NM43 557 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 SPAG7O75391 227 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 GABBR2O75899 941 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 TMEM63AO94886 807 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 AKAP5P24588 427 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 HIC1Q14526 733 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 ZBTB6Q15916 424 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 C1orf228Q6PIY5 440 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 OLFML1Q6UWY5 402 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 TRABD2AQ86V40 505 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 ANKS4BQ8N8V4 417 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 DPEP3Q9H4B8 488 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 KIF9Q9HAQ2 790 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 NGRNQ9NPE2 291 aaKnown RBP19.59■□□□□ 0.73
USP49-202ENST00000373010 NKIRAS1Q9NYS0 192 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 ACTL7BQ9Y614 415 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 CLUHO75153 1309 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 STX2P32856 288 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 YARSP54577 528 aaKnown RBP19.59■□□□□ 0.73
USP49-202ENST00000373010 ARL4CP56559 192 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 ZC3H12AQ5D1E8 599 aaKnown RBP19.59■□□□□ 0.73
USP49-202ENST00000373010 NUGGCQ68CJ6 796 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 DARS2Q6PI48 645 aaKnown RBP19.59■□□□□ 0.73
USP49-202ENST00000373010 OR6B3Q8NGW1 331 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 KHSRPQ92945 711 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP49-202ENST00000373010 WDR83Q9BRX9 315 aaKnown RBP19.59■□□□□ 0.73
USP49-202ENST00000373010 B3GNT5Q9BYG0 378 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 DERAQ9Y315 318 aa19.59■□□□□ 0.73
USP49-202ENST00000373010 DOCK3Q8IZD9 2030 aa19.58■□□□□ 0.73
USP49-202ENST00000373010 NDC80O14777 642 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 PIAS1O75925 651 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 RECQL4O94761 1208 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 CYP2C9P11712 490 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 SSTR1P30872 391 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 ITIH4Q14624 930 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 EFTUD2Q15029 972 aaKnown RBP eCLIP19.58■□□□□ 0.72
USP49-202ENST00000373010 BEST2Q8NFU1 509 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 MIS12Q9H081 205 aa19.58■□□□□ 0.72
USP49-202ENST00000373010 FAM124BQ9H5Z6 455 aaPredicted RBP19.58■□□□□ 0.72
USP49-202ENST00000373010 SNX3O60493 162 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 BASP1P80723 227 aaKnown RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 ROR1Q01973 937 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 SLC20A2Q08357 652 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 KRT81Q14533 505 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 NOMO1Q15155 1222 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 STILQ15468 1287 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 ZKSCAN8Q15776 578 aaPredicted RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 FAM110CQ1W6H9 321 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 SOWAHAQ2M3V2 549 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 NOTUMQ6P988 496 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 TDRPQ86YL5 185 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 PYROXD1Q8WU10 500 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 FAM172AQ8WUF8 416 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 PARK7Q99497 189 aaKnown RBP19.57■□□□□ 0.72
USP49-202ENST00000373010 SLC4A5Q9BY07 1137 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 UBN1Q9NPG3 1134 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 KLK14Q9P0G3 267 aa19.57■□□□□ 0.72
USP49-202ENST00000373010 TRIP12Q14669 1992 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms