RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CIB2O75838 187 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 RAD17O75943 681 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 RAP1GDS1P52306 607 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 IRX4P78413 519 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 UBAP2LQ14157 1087 aaKnown RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 PSMD6Q15008 389 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 TAF5Q15542 800 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CHSY1Q86X52 802 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 NDNQ99608 321 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CNTN3Q9P232 1028 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 FETUBQ9UGM5 382 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 C3orf70A6NLC5 250 aaPredicted RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 CAPN14A8MX76 684 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 PRR5-ARHGAP8B1AHC4 643 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 RNASEH1O60930 286 aaKnown RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 ENTPD3O75355 529 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ICAM1P05362 532 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 ARHGAP8P85298 464 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 BMPR2Q13873 1038 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 DBN1Q16643 649 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ZCCHC23Q6ZST2 131 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 RAPH1Q70E73 1250 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 EMC1Q8N766 993 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 MTBPQ96DY7 904 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 C20orf27Q9GZN8 174 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 XPNPEP1Q9NQW7 623 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 MYH9P35579 1960 aaKnown RBP14.28□□□□□ -0.12
USP49-201ENST00000373006 I3L4J1 428 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 MAGEC1O60732 1142 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 PSMA2P25787 234 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CAP2P40123 477 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 AP2B1P63010 937 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CDC16Q13042 620 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 CHI3L2Q15782 390 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 C6orf163Q5TEZ5 329 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 LRRC38Q5VT99 294 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 GPAT2Q6NUI2 795 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 KIAA0319LQ8IZA0 1049 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ARFGAP1Q8N6T3 406 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ARL10Q8N8L6 244 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 SLC44A1Q8WWI5 657 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 MRIQ9BWK5 157 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 TMOD2Q9NZR1 351 aa14.28□□□□□ -0.12
USP49-201ENST00000373006 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 E7ESA3 106 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 HNRNPRO43390 633 aaKnown RBP14.27□□□□□ -0.12
USP49-201ENST00000373006 TM7SF2O76062 418 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 PGM5Q15124 567 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 NPNTQ6UXI9 565 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 HIPK4Q8NE63 616 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 USP6NLQ92738 828 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 RMDN3Q96TC7 470 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 EBF4Q9BQW3 602 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 TMEM39BQ9GZU3 492 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.12
USP49-201ENST00000373006 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.12
USP49-201ENST00000373006 QSER1Q2KHR3 1735 aa14.27□□□□□ -0.12
USP49-201ENST00000373006 CXorf49A8MYA2 514 aaPredicted RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 UGT1A9O60656 530 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 SORBS2O94875 1100 aaKnown RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 CALB1P05937 261 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 WEE2P0C1S8 567 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 EIF3EP60228 445 aaKnown RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 ACTR3P61158 418 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 SLC25A3Q00325 362 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 SLC18A2Q05940 514 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 NCOA4Q13772 614 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 LTBP1Q14766 1721 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 NET1Q7Z628 596 aaPredicted RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 FAM160B2Q86V87 743 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 WDTC1Q8N5D0 677 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 HSPH1Q92598 858 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 TMEM143Q96AN5 459 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 FAM210AQ96ND0 272 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 NR1H4Q96RI1 486 aaPredicted RBP14.27□□□□□ -0.13
USP49-201ENST00000373006 SPATA16Q9BXB7 569 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 CALN1Q9BXU9 219 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 SHCBP1LQ9BZQ2 653 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.13
USP49-201ENST00000373006 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms