RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 NUDT17P0C025 328 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 EIF3EP60228 445 aaKnown RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 AUHQ13825 339 aaKnown RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 GPR142Q7Z601 462 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 C12orf50Q8NA57 414 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 IFT122Q9HBG6 1241 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 GGT7Q9UJ14 662 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 TSPAN16Q9UKR8 245 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 DNAJC25-GNG10A0A024R161 153 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 TMEM120BA0PK00 339 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 C15orf59Q2T9L4 293 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 PLEKHH3Q7Z736 793 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 WDTC1Q8N5D0 677 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 AGAP11Q8TF27 550 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 ZC3H15Q8WU90 426 aaKnown RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 IKBKGQ9Y6K9 419 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 EVPLQ92817 2033 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 RASA4BC9J798 803 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 RASA4O43374 803 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 LIASO43766 372 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 FAM71DQ8N9W8 422 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 LRRN4Q8WUT4 740 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 CFAP57Q96MR6 1250 aa17.86■□□□□ 0.45
VEGFA-205ENST00000372067 GBA2Q9HCG7 927 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-205ENST00000372067 IGKV6-21A0A0C4DH24 114 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 RBM47A0AV96 593 aaKnown RBP17.85■□□□□ 0.45
VEGFA-205ENST00000372067 E5RJQ4 531 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 BANF1O75531 89 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 LCP1P13796 627 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 TAF5Q15542 800 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 NUGGCQ68CJ6 796 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 HIBCHQ6NVY1 386 aaPredicted RBP17.85■□□□□ 0.45
VEGFA-205ENST00000372067 CENPUQ71F23 418 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 SLC4A11Q8NBS3 891 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 RXFP2Q8WXD0 754 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 MCM3APO60318 1980 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 ATP6V1G1O75348 118 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 CD48P09326 243 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 SMPD1P17405 629 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 MIPP30301 263 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 PTP4A2Q12974 167 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 CCDC197Q8NCU1 140 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 BEST2Q8NFU1 509 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 PYROXD1Q8WU10 500 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 SEC16BQ96JE7 1060 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 SNX25Q9H3E2 840 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 DNAAF2Q9NVR5 837 aaKnown RBP17.85■□□□□ 0.45
VEGFA-205ENST00000372067 WDR35Q9P2L0 1181 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 RBP3P10745 1247 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 VDRP11473 427 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 CREB1P16220 341 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 TRIM42Q8IWZ5 723 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 PPTC7Q8NI37 304 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 CCHCR1Q8TD31 782 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 DNAJB3Q8WWF6 145 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 BRI3BPQ8WY22 251 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 ASB7Q9H672 318 aa17.85■□□□□ 0.45
VEGFA-205ENST00000372067 MMRN1Q13201 1228 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 LRRC34Q8IZ02 419 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SPATA18Q8TC71 538 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 PGM2Q96G03 612 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 TINF2Q9BSI4 451 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 AP5M1Q9H0R1 490 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 USP18Q9UMW8 372 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SIGLEC16A6NMB1 481 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SMIM24O75264 130 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SDC4P31431 198 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 ZNF132P52740 706 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 VCPP55072 806 aaKnown RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 TAPT1Q6NXT6 567 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SCUBE3Q8IX30 993 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SHCBP1Q8NEM2 672 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 C18orf25Q96B23 403 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 PARK7Q99497 189 aaKnown RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 LPIN3Q9BQK8 851 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 ZFATQ9P243 1243 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 BARX2Q9UMQ3 279 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 hCG_1818297A0A087WSY0 165 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 TRAPPC3O43617 180 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SETSIPP0DME0 302 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 GPD1P21695 349 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 YWHAGP61981 247 aaKnown RBP eCLIP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 BEX3Q00994 111 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 TWF2Q6IBS0 349 aaKnown RBP17.84■□□□□ 0.45
VEGFA-205ENST00000372067 FAM47EQ6ZV65 393 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 P3H4Q92791 437 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 SLC12A6Q9UHW9 1150 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 CYTH4Q9UIA0 394 aa17.84■□□□□ 0.45
VEGFA-205ENST00000372067 STRNO43815 780 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 TSPAN1O60635 241 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 LRCH4O75427 683 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 MYBPC3Q14896 1274 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 SH3PXD2AQ5TCZ1 1133 aa17.83■□□□□ 0.45
VEGFA-205ENST00000372067 NPNTQ6UXI9 565 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms