RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TAMM41Q96BW9 452 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ADAM7Q9H2U9 754 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ZDHHC18Q9NUE0 388 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 COX16Q9P0S2 106 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PDXKO00764 312 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 CALCAP01258 141 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ECHS1P30084 290 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 BNIP3Q12983 259 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ACVR2BQ13705 512 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 TJAP1Q5JTD0 557 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 GALNT18Q6P9A2 607 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SYDE1Q6ZW31 735 aaPredicted RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ZFP28Q8NHY6 868 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 MIPEPQ99797 713 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SH3GLB2Q9NR46 395 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SLC9A2Q9UBY0 812 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 FADS3Q9Y5Q0 445 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PTGES3LE9PB15 166 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 H0Y626 953 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ZNF862O60290 1169 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 USP12O75317 370 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SERPINI2O75830 405 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 NOL4O94818 638 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 IL10P22301 178 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 HSPA13P48723 471 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ENDOVQ8N8Q3 282 aaKnown RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 CCNYQ8ND76 341 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 DEPTORQ8TB45 409 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 RNF38Q9H0F5 515 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 SAE1Q9UBE0 346 aaPredicted RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 TOR1BO14657 336 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 GABBR2O75899 941 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PABPC4LP0CB38 370 aaKnown RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PSMA2P25787 234 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 NPEPPSP55786 919 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 KCNA1Q09470 495 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 METTL21CQ5VZV1 264 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PQLC1Q8N2U9 271 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 HDAC2Q92769 488 aaKnown RBP12.22□□□□□ -0.45
PTPN1-201ENST00000371621 ANKRD36BP1Q96IX9 119 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 TMED5Q9Y3A6 229 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 JCADQ9P266 1359 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 MICAL3Q7RTP6 2002 aa12.22□□□□□ -0.45
PTPN1-201ENST00000371621 PSMD12O00232 456 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 FAM86B2P0C5J1 330 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 KCNA2P16389 499 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 SEPHS1P49903 392 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 KCNT1Q5JUK3 1230 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 TTC13Q8NBP0 860 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 LNX1Q8TBB1 728 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 C10orf82Q8WW14 230 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 MYH6P13533 1939 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 A0A0A6YYK5 440 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 PORP16435 677 aaPredicted RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 RPA1P27694 616 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 GARSP41250 739 aaKnown RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 CLK1P49759 484 aaKnown RBP12.21□□□□□ -0.45
PTPN1-201ENST00000371621 HSPA2P54652 639 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 C16orf89Q6UX73 402 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 SLC47A2Q86VL8 602 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 CPNE8Q86YQ8 564 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 GATA6Q92908 595 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 EXT2Q93063 718 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 HEPHQ9BQS7 1158 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 GIN1Q9NXP7 522 aa12.21□□□□□ -0.45
PTPN1-201ENST00000371621 A0A087WXM4 84 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 CLOCKO15516 846 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A9O60656 530 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 CST8O60676 142 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A6P19224 532 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A1P22309 533 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A4P22310 534 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A3P35503 534 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A5P35504 534 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 SERPINB10P48595 397 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 IQSEC1Q6DN90 963 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 SNX32Q86XE0 403 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 RNF135Q8IUD6 432 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 PSMA8Q8TAA3 256 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 FNDC8Q8TC99 324 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.46
PTPN1-201ENST00000371621 AGAP3Q96P47 875 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 REXO4Q9GZR2 422 aaKnown RBP12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A7Q9HAW7 530 aa12.21□□□□□ -0.46
PTPN1-201ENST00000371621 UGT1A10Q9HAW8 530 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms