RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 COPEO14579 308 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TSPAN1O60635 241 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 HMGCRP04035 888 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SHBGP04278 402 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 KITP10721 976 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PRKAR2AP13861 404 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 ZNF844Q08AG5 666 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SPARCL1Q14515 664 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 ZNF268Q14587 947 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SNX17Q15036 470 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TAF5Q15542 800 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 CNGA2Q16280 664 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 DEFB106AQ8N104 65 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 CHMP6Q96FZ7 201 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TTC25Q96NG3 672 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TGS1Q96RS0 853 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SYT15Q9BQS2 421 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 NEUROG2Q9H2A3 272 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TRABDQ9H4I3 376 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 LCMT1Q9UIC8 334 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 AP4E1Q9UPM8 1137 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 KCNK1O00180 336 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PAEPP09466 180 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 DARSP14868 501 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PECAM1P16284 738 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 AMPD1P23109 780 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SSTR1P30872 391 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 ACADSBP45954 432 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 RABGGTBP53611 331 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 FKBP1BP68106 108 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 BST2Q10589 180 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 RCN2Q14257 317 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 STAT4Q14765 748 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 CRELD2Q6UXH1 353 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 FAM183BPQ6ZVS7 135 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SYDE1Q6ZW31 735 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 DEFB128Q7Z7B8 93 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 CDKL3Q8IVW4 592 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 MCUQ8NE86 351 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 TACO1Q9BSH4 297 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PPP1R12CQ9BZL4 782 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 ELOVL4Q9GZR5 314 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 FZD8Q9H461 694 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 UBP1Q9NZI7 540 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 FIS1Q9Y3D6 152 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SNAI1O95863 264 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 BDNFP23560 247 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 HSPA9P38646 679 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PIGZQ86VD9 579 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 MCUR1Q96AQ8 359 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 PABPC5Q96DU9 382 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 EPAS1Q99814 870 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 ZBED2Q9BTP6 218 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 WDCPQ9H6R7 721 aa7.43□□□□□ -1.22
TGFBR3-202ENST00000370399 SMIM28A0A1B0GU29 152 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 SIGLEC16A6NMB1 481 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 CES2O00748 559 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TRAPPC3O43617 180 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 PQBP1O60828 265 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 AGTP01019 485 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 HOXC6P09630 235 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 GJA5P36382 358 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TMPRSS15P98073 1019 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 ZC3H12AQ5D1E8 599 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 LRIG3Q6UXM1 1119 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 PHF13Q86YI8 300 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 RYBPQ8N488 228 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TWNKQ96RR1 684 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 FSD1LQ9BXM9 530 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 RNF39Q9H2S5 420 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 CDHR5Q9HBB8 845 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TMBIM4Q9HC24 238 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 BFARQ9NZS9 450 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 CTNNAL1Q9UBT7 734 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 ADAMTS5Q9UNA0 930 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 SSX2IPQ9Y2D8 614 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 SMCHD1A6NHR9 2005 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TRIM66O15016 1216 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 USP17L7P0C7H9 530 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 VCPP55072 806 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TTMPQ5BVD1 217 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 C6orf163Q5TEZ5 329 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 NXNQ6DKJ4 435 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 HIBCHQ6NVY1 386 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 CCDC62Q6P9F0 684 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 LRRC31Q6UY01 552 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 ZC3H3Q8IXZ2 948 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 FBXO36Q8NEA4 188 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 MAML1Q92585 1016 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 KLHL29Q96CT2 875 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 APBA2Q99767 749 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 C2CD2Q9Y426 696 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 SCN9AQ15858 1988 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 TMEM191CA6NGB0 347 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 GOLGA8CPA6NN73 597 aa7.42□□□□□ -1.22
TGFBR3-202ENST00000370399 BANF1O75531 89 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms