RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 I3L4J1 428 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 RGL2O15211 777 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ZSCAN9O15535 394 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 TM7SF2O76062 418 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 IL1R2P27930 398 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CDK7P50613 346 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 RAP1GDS1P52306 607 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 AQP4P55087 323 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ACTR3P61158 418 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF200P98182 395 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DLG1Q12959 904 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 C6orf163Q5TEZ5 329 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 EMC1Q8N766 993 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 SLC35B2Q8TB61 432 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 AZIN2Q96A70 460 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 TESPA1A2RU30 521 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 DYNC1I2Q13409 638 aaKnown RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 NCOA4Q13772 614 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 OR5B17Q8NGF7 314 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 NKD2Q969F2 451 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 NR1H4Q96RI1 486 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 APOL6Q9BWW8 343 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 LYPLA1O75608 230 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 ZMPSTE24O75844 475 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 WEE2P0C1S8 567 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 PEX2P28328 305 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 INHBCP55103 352 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 BPIFB4P59827 614 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 ASPHQ12797 758 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 AOC3Q16853 763 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 ENOSF1Q7L5Y1 443 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 NET1Q7Z628 596 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 PHF13Q86YI8 300 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
PHGDH-201ENST00000369407 ADAMTS6Q9UKP5 1117 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 PCNTO95613 3336 aa12.82□□□□□ -0.36
PHGDH-201ENST00000369407 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 MAGEC1O60732 1142 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 FUT4P22083 530 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 GSTA3Q16772 222 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 DRICH1Q6PGQ1 229 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 SCARA5Q6ZMJ2 495 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 HSPH1Q92598 858 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 E2F7Q96AV8 911 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 FBXL18Q96ME1 805 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 CNTN3Q9P232 1028 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TAGLN3Q9UI15 199 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF862O60290 1169 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 MMP8P22894 467 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 RFC1P35251 1148 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 LIG4P49917 911 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ORC1Q13415 861 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ZACNQ401N2 412 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TCHHL1Q5QJ38 904 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 USP37Q86T82 979 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 RSPH3Q86UC2 560 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 OR6Y1Q8NGX8 325 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 JOSD2Q8TAC2 188 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 PRMT6Q96LA8 375 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TAAR1Q96RJ0 339 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 LOC100653049A0A140TA62 436 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 KRT34O76011 436 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TGDSO95455 350 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 PSMA2P25787 234 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 CRABP2P29373 138 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 TRMT5Q32P41 509 aaKnown RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 SH2D5Q6ZV89 423 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 KIAA0319LQ8IZA0 1049 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ST13P4Q8IZP2 240 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-201ENST00000369407 ST6GALNAC4Q9H4F1 302 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
PHGDH-201ENST00000369407 SERPINA10Q9UK55 444 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms