RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 VIPR2P41587 438 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 TUBP50607 506 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 MFAP3P55082 362 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 MAP3K7CLP57077 242 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 TAF10Q12962 218 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 KCNJ12Q14500 433 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 KLHL40Q2TBA0 621 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.72
CHTOP-202ENST00000368687 TXNDC8Q6A555 127 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 TRIM65Q6PJ69 517 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 POTEHQ6S545 545 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 CLEC20AQ6ZU45 233 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 UBR7Q8N806 425 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 KIAA1958Q8N8K9 716 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 BPIFB1Q8TDL5 484 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 FBXO32Q969P5 355 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 PRRX2Q99811 253 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 SMOQ99835 787 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 KCNH6Q9H252 994 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 HESX1Q9UBX0 185 aa19.58■□□□□ 0.72
CHTOP-202ENST00000368687 HELZP42694 1942 aaKnown RBP19.58■□□□□ 0.72
CHTOP-202ENST00000368687 ZNF840PA6NDX5 716 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 GLULP15104 373 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 CLCN5P51795 746 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 BCAT1P54687 386 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 MLLT6P55198 1093 aaPredicted RBP19.57■□□□□ 0.72
CHTOP-202ENST00000368687 USP46P62068 366 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 MYL5Q02045 173 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 VWA3BQ502W6 1294 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 TCP11X2Q5H9J9 407 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 SNX30Q5VWJ9 437 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 PHLDB3Q6NSJ2 640 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 TMEM270Q6UE05 265 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 ANKRD52Q8NB46 1076 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 NDST4Q9H3R1 872 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 TRPC7Q9HCX4 862 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 APEX2Q9UBZ4 518 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 PCDHB4Q9Y5E5 795 aa19.57■□□□□ 0.72
CHTOP-202ENST00000368687 MYO16Q9Y6X6 1858 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 CD19P15391 556 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 TCF3P15923 654 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 HDCP19113 662 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 GDI1P31150 447 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 MLF2Q15773 248 aaPredicted RBP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 CC2D1AQ6P1N0 951 aaPredicted RBP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 DDX42Q86XP3 938 aaKnown RBP eCLIP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 ZMIZ2Q8NF64 920 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 PLA2G2FQ9BZM2 168 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 TLR8Q9NR97 1041 aaKnown RBP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 TMEM63CQ9P1W3 806 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 ARHGAP26Q9UNA1 814 aa19.56■□□□□ 0.72
CHTOP-202ENST00000368687 KIF26AQ9ULI4 1882 aaPredicted RBP19.56■□□□□ 0.72
CHTOP-202ENST00000368687 PRAMEF12O95522 483 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 ACO1P21399 889 aaKnown RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 PSEN1P49768 467 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 VCPP55072 806 aaKnown RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 STARD6P59095 220 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 TYRO3Q06418 890 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 IFRD2Q12894 506 aaPredicted RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 GRM2Q14416 872 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 SLC44A4Q53GD3 710 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 IER5LQ5T953 404 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 ASTLQ6HA08 431 aaPredicted RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 ST13P5Q8NFI4 369 aaPredicted RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 CSGALNACT1Q8TDX6 532 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 USP13Q92995 863 aaPredicted RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 FAM122AQ96E09 287 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 UBE2TQ9NPD8 197 aaPredicted RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 CA14Q9ULX7 337 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 CNTN6Q9UQ52 1028 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 SCML2Q9UQR0 700 aa19.55■□□□□ 0.72
CHTOP-202ENST00000368687 MRPS17Q9Y2R5 130 aaKnown RBP19.55■□□□□ 0.72
CHTOP-202ENST00000368687 MAN2B1O00754 1011 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 BEST1O76090 585 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 OLFM2O95897 454 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 OAS1P00973 400 aaKnown RBP19.54■□□□□ 0.72
CHTOP-202ENST00000368687 SETSIPP0DME0 302 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 SLC7A9P82251 487 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 BST2Q10589 180 aaKnown RBP19.54■□□□□ 0.72
CHTOP-202ENST00000368687 MEA1Q16626 185 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 HECTD3Q5T447 861 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 CDKAL1Q5VV42 579 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 RRAGAQ7L523 313 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 TADA2BQ86TJ2 420 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 ARHGEF19Q8IW93 802 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 RBBP8NLQ8NC74 664 aaPredicted RBP19.54■□□□□ 0.72
CHTOP-202ENST00000368687 SCAMP5Q8TAC9 235 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 CDK5RAP1Q96SZ6 601 aaKnown RBP19.54■□□□□ 0.72
CHTOP-202ENST00000368687 NELL2Q99435 816 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 CRACR2AQ9BSW2 395 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 SAMSN1Q9NSI8 373 aaKnown RBP19.54■□□□□ 0.72
CHTOP-202ENST00000368687 TSPAN16Q9UKR8 245 aa19.54■□□□□ 0.72
CHTOP-202ENST00000368687 TICRRQ7Z2Z1 1910 aa19.53■□□□□ 0.72
CHTOP-202ENST00000368687 KRBA1A5PL33 1030 aa19.53■□□□□ 0.72
CHTOP-202ENST00000368687 C2orf78A6NCI8 922 aa19.53■□□□□ 0.72
CHTOP-202ENST00000368687 STK25O00506 426 aa19.53■□□□□ 0.72
CHTOP-202ENST00000368687 PES1O00541 588 aaKnown RBP19.53■□□□□ 0.72
CHTOP-202ENST00000368687 XPO1O14980 1071 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms