RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 SNRNP27Q8WVK2 155 aaKnown RBP8.14□□□□□ -1.11
CD46-207ENST00000367041 TTC17Q96AE7 1141 aa8.14□□□□□ -1.11
CD46-207ENST00000367041 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
CD46-207ENST00000367041 C6orf203Q9P0P8 240 aaPredicted RBP8.14□□□□□ -1.11
CD46-207ENST00000367041 PLLPQ9Y342 182 aa8.14□□□□□ -1.11
CD46-207ENST00000367041 PSMD10O75832 226 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MT-ND3P03897 115 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 LDHCP07864 332 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MAPTP10636 758 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 CD58P19256 250 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 CDK9P50750 372 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 AQP5P55064 265 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ZNF200P98182 395 aaPredicted RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 PPIDQ08752 370 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 GK3PQ14409 553 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 PDCD4Q53EL6 469 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 PLEKHA7Q6IQ23 1121 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 PACS1Q6VY07 963 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 CLEC10AQ8IUN9 316 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 RCOR2Q8IZ40 523 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 FBXO36Q8NEA4 188 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 SLC26A7Q8TE54 656 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 PYROXD1Q8WU10 500 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 RANBP9Q96S59 729 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 SRPK1Q96SB4 655 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 HNRNPABQ99729 332 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 SIKE1Q9BRV8 207 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 KCNQ5Q9NR82 932 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ITGB1BP2Q9UKP3 347 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 DTNAQ9Y4J8 743 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ZNF831Q5JPB2 1677 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 GAKO14976 1311 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 IQANK1A0A1B0GTG1 560 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 TMEM247A6NEH6 219 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ITM2AO43736 263 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ADRB2P07550 413 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 HOXD12P35452 270 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MLH1P40692 756 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MXI1P50539 228 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MTTPP55157 894 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 KCNC4Q03721 635 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 FAAP100Q0VG06 881 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 MAMLD1Q13495 774 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 PAOXQ6QHF9 649 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ARID3BQ8IVW6 561 aaPredicted RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 ZNF778Q96MU6 729 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 EBF4Q9BQW3 602 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 CBWD1Q9BRT8 395 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 STN1Q9H668 368 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 ZNF395Q9H8N7 513 aaPredicted RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 PNPLA8Q9NP80 782 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 ZNRF3Q9ULT6 936 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
CD46-207ENST00000367041 TDRKHQ9Y2W6 561 aaKnown RBP8.13□□□□□ -1.11
CD46-207ENST00000367041 CBFA2T3O75081 653 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 GSRP00390 522 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 KRT10P13645 584 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 TM4SF1P30408 202 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 PTK7Q13308 1070 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 KRT81Q14533 505 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 SYCP2LQ5T4T6 812 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 POTEHQ6S545 545 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 B3GNT9Q6UX72 402 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ZNF677Q86XU0 584 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 IGDCC3Q8IVU1 814 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 PQLC1Q8N2U9 271 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 FBXW8Q8N3Y1 598 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 CCDC33Q8N5R6 958 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 CYP2W1Q8TAV3 490 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 DQX1Q8TE96 717 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 MECRQ9BV79 373 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ZNF341Q9BYN7 854 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 RIMS3Q9UJD0 308 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 PSMD13Q9UNM6 376 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 PCDHA1Q9Y5I3 950 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 hCG_1818297A0A087WSY0 165 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 RBP3P10745 1247 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 COL6A2P12110 1019 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ITGAXP20702 1163 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 RELAQ04206 551 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 LRRC38Q5VT99 294 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ATG16L1Q676U5 607 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 C15orf52Q6ZUT6 534 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 ANO5Q75V66 913 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 E2F7Q96AV8 911 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 AGAP3Q96P47 875 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 ACAP3Q96P50 834 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 MRPL1Q9BYD6 325 aaKnown RBP8.12□□□□□ -1.11
CD46-207ENST00000367041 KLC2Q9H0B6 622 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 RMI1Q9H9A7 625 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 PLGRKTQ9HBL7 147 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 HSPBP1Q9NZL4 362 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 THEGQ9P2T0 379 aa8.12□□□□□ -1.11
CD46-207ENST00000367041 RSL24D1Q9UHA3 163 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms