RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 PEX11AO75192 247 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 PROCP04070 461 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 SLC25A3Q00325 362 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 KCNA1Q09470 495 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 RNF43Q68DV7 783 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 ACAD11Q709F0 780 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 BORCS5Q969J3 196 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 ARHGEF3Q9NR81 526 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 GIN1Q9NXP7 522 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 TBX10O75333 385 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 TNFRSF21O75509 655 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 OR6B1O95007 311 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 HSPA13P48723 471 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 NEK3P51956 506 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 MRPS22P82650 360 aaKnown RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 AP3B2Q13367 1082 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 MAPK6Q16659 721 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 HIF1AQ16665 826 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 CCSAPQ6IQ19 270 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 RFWD3Q6PCD5 774 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 PROM2Q8N271 834 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 HAS1Q92839 578 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 TIPINQ9BVW5 301 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 BBS2Q9BXC9 721 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 SAR1AQ9NR31 198 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 SLC12A4Q9UP95 1085 aa12.17□□□□□ -0.46
PRKN-206ENST00000366898 N4BP2Q86UW6 1770 aaPredicted RBP12.17□□□□□ -0.46
PRKN-206ENST00000366898 GABBR2O75899 941 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 TNNI1P19237 187 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 COILP38432 576 aaPredicted RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 CCT3P49368 545 aaKnown RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SCFD1Q8WVM8 642 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SEPT8Q92599 483 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 USP13Q92995 863 aaPredicted RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SEMA6AQ9H2E6 1030 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 DMTF1Q9Y222 760 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 MSH4O15457 936 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PEX3P56589 373 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SLC45A4Q5BKX6 768 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 HHIPL2Q6UWX4 724 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PACS1Q6VY07 963 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SLC7A5P1Q8MH63 180 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 ACTRT1Q8TDG2 376 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PDCD6IPQ8WUM4 868 aaKnown RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 CNDP1Q96KN2 507 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 LIN28AQ9H9Z2 209 aaKnown RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 ABCB10Q9NRK6 738 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PDZK1P1A8MUH7 402 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 GSC2O15499 205 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 UQCRBP14927 111 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 MMP13P45452 471 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 SNX16P57768 344 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 TMEM62Q0P6H9 643 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 PPP1R18Q6NYC8 613 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 DHDDSQ86SQ9 333 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 CLEC4FQ8N1N0 589 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 ZSWIM2Q8NEG5 633 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
PRKN-206ENST00000366898 ELMO3Q96BJ8 720 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 SOX13Q9UN79 622 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
PRKN-206ENST00000366898 TBKBP1A7MCY6 615 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 FAM86B1E9PN63 330 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
PRKN-206ENST00000366898 TNPO2O14787 897 aaKnown RBP12.15□□□□□ -0.46
PRKN-206ENST00000366898 PRLP01236 227 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 FAM86B2P0C5J1 330 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 COMTP21964 271 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKN-206ENST00000366898 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
PRKN-206ENST00000366898 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 LXNQ9BS40 222 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
PRKN-206ENST00000366898 FADS3Q9Y5Q0 445 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 A6NHS1 94 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.46
PRKN-206ENST00000366898 UCHL3P15374 230 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms