RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 GORABQ5T7V8 394 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 NFRKBQ6P4R8 1299 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 CRIP3Q6Q6R5 217 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.06
H3F3A-201ENST00000366813 CCDC105Q8IYK2 499 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 MIGA1Q8NAN2 632 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 HIPK4Q8NE63 616 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 CAGE1Q8TC20 777 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 COG1Q8WTW3 980 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 STAG1Q8WVM7 1258 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 SCAND2PQ9GZW5 306 aaPredicted RBP8.46□□□□□ -1.06
H3F3A-201ENST00000366813 RAVER2Q9HCJ3 691 aaKnown RBP8.46□□□□□ -1.06
H3F3A-201ENST00000366813 TYW1Q9NV66 732 aaKnown RBP8.46□□□□□ -1.06
H3F3A-201ENST00000366813 DDX56Q9NY93 547 aaKnown RBP8.46□□□□□ -1.06
H3F3A-201ENST00000366813 ATG2AQ2TAZ0 1938 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 SPEGQ15772 3267 aa8.46□□□□□ -1.06
H3F3A-201ENST00000366813 FANCIQ9NVI1 1328 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 MYH1P12882 1939 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 FOCADQ5VW36 1801 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 MYO10Q9HD67 2058 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 FOXS1O43638 330 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 PRKD3O94806 890 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 MPIG6BO95866 241 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 ZNF888P0CJ79 500 aaPredicted RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 CKBP12277 381 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 CD40P25942 277 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 MC4RP32245 332 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 HMGA2P52926 109 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 RAC3P60763 192 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 DMWDQ09019 674 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 CAMK1Q14012 370 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 PRKD1Q15139 912 aaPredicted RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 WDR72Q3MJ13 1102 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 RBM23Q86U06 439 aaKnown RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 UBALD2Q8IYN6 164 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 NEIL1Q96FI4 390 aaPredicted RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 NUP88Q99567 741 aaPredicted RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 PUS7LQ9H0K6 701 aaKnown RBP8.45□□□□□ -1.06
H3F3A-201ENST00000366813 LMAN2LQ9H0V9 348 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 ZZEF1O43149 2961 aa8.45□□□□□ -1.06
H3F3A-201ENST00000366813 GCN1Q92616 2671 aaKnown RBP8.44□□□□□ -1.06
H3F3A-201ENST00000366813 ASB14A6NK59 587 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 C5orf67F2Z3F1 127 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 AKR1B1P15121 316 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 ATF7P17544 494 aaPredicted RBP8.44□□□□□ -1.06
H3F3A-201ENST00000366813 BMPR1AP36894 532 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 NRIP1P48552 1158 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 DUSP28Q4G0W2 176 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 RASSF3Q86WH2 238 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 DBF4BQ8NFT6 615 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 WDR48Q8TAF3 677 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 RIN2Q8WYP3 895 aaPredicted RBP8.44□□□□□ -1.06
H3F3A-201ENST00000366813 SUSD6Q92537 303 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 ERCC4Q92889 916 aaPredicted RBP8.44□□□□□ -1.06
H3F3A-201ENST00000366813 SLF1Q9BQI6 1058 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 TRIM8Q9BZR9 551 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 MS4A5Q9H3V2 200 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 SH2D4AQ9H788 454 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 VTA1Q9NP79 307 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 UCKL1Q9NWZ5 548 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 SORCS3Q9UPU3 1222 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 SCN10AQ9Y5Y9 1956 aa8.44□□□□□ -1.06
H3F3A-201ENST00000366813 MICAL3Q7RTP6 2002 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ASH1LQ9NR48 2969 aaKnown RBP8.43□□□□□ -1.06
H3F3A-201ENST00000366813 CYR61O00622 381 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 PARNO95453 639 aaKnown RBP8.43□□□□□ -1.06
H3F3A-201ENST00000366813 RB1P06400 928 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 LINC00271P0C7V0 271 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 EEF2P13639 858 aaKnown RBP8.43□□□□□ -1.06
H3F3A-201ENST00000366813 DNAJB1P25685 340 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 CPT1AP50416 773 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ADCY1Q08828 1119 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 FAPQ12884 760 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 BRDTQ58F21 947 aaPredicted RBP8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ZMAT1Q5H9K5 638 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ZNF618Q5T7W0 954 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 Q8N1X5 172 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 OR6J1Q8NGC5 347 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 TOP1MTQ969P6 601 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 E2F7Q96AV8 911 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ADOQ96SZ5 270 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 AMNQ9BXJ7 453 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 ZDHHC5Q9C0B5 715 aa8.43□□□□□ -1.06
H3F3A-201ENST00000366813 K7ESF4 209 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 ATP2A1O14983 1001 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 ZBED4O75132 1171 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 KATNA1O75449 491 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 MMP1P03956 469 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 CYP2D6P10635 497 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 AOC1P19801 751 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 RRADP55042 308 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 MTMR1Q13613 665 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 CNTD1Q8N815 330 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 SUMF1Q8NBK3 374 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 DYNLL2Q96FJ2 89 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 APOL5Q9BWW9 433 aa8.42□□□□□ -1.06
H3F3A-201ENST00000366813 WDR11Q9BZH6 1224 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms